Query= MSMg01no424_m19.b1 MSMg01no424_m19.b1 CHROMAT_FILE:
MSMg01no424_m19.b1 PHD_FILE: MSMg01no424_m19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:50 2005
(299 letters)
>mm_chr18_65002801_65003495
Length = 695
Score = 514 bits (266), Expect = e-150
Identities = 290/300 (96%), Gaps = 5/300 (1%)
Strand = Plus / Minus
Query: 1 ttctaattaccattttaacagtagttctgggagaccttaggttgatgatccagtcaatga 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 433 ttctaattaccattttaacagtagtcctgggagaccttaggttgatgatccagtcaatga 374
Query: 61 gcagtcagtcatgtcttaagcctaaccgaaagacactgtgaccatgacattcctagccac 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 373 gcagtcagtcatgtcttaagcctaaccgaaagacactgtgaccatgactttcctagccac 314
Query: 121 tgcctagtgagtctctatgcttgaaaggtcacgcagcaataagggaaagcagagctttca 180
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 313 tgcc----gagtctctatgcttgaaaggtcatgcagcaataagggaaagcagagctttca 258
Query: 181 gttcagctcccaggtatttgagtctttcacacagccacttcagacaggctaaggagctgt 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 257 gttcagctcccaggtatttgagtctttcacacagccacttcagacaggttaaggagctgt 198
Query: 241 cctaacttcgtttctttctgtgat-aaataccccaacaaaagtaacttatgggagaaagg 299
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 197 cctaacttcgtttctttctgtgataaaataccccaacaaaagtaacttaagggagaaagg 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 695
Length adjustment: 9
Effective length of query: 290
Effective length of database: 686
Effective search space: 198940
Effective search space used: 198940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_m19.g1 MSMg01no424_m19.g1 CHROMAT_FILE:
MSMg01no424_m19.g1 PHD_FILE: MSMg01no424_m19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:51 2005
(249 letters)
>mm_chr18_64849876_64850524
Length = 649
Score = 458 bits (237), Expect = e-133
Identities = 246/249 (98%)
Strand = Plus / Plus
Query: 1 ttctaagctgaaataaaccctttgctcccctaagttgttttttctcatgatcacagcaat 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 ttctaagctgaaataaaccctttgcttccctaagttgttttttctcatgatcacagcaat 260
Query: 61 agaaaccctaaggcaggtgttgtggtgacatcaggctttgtggtctgttcactgaattct 120
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaccctaaggcaggcgtcgtggtgacatcaggctttgtggtctgttcactgaattct 320
Query: 121 ggggagcactagtatgtctgggagggccaggatttggctcttgaaagagttggaaactac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggagcactagtatgtctgggagggccaggatttggctcttgaaagagttggaaactac 380
Query: 181 tttaagtagagacttgaaggaagaaagcagccagattgcatcaatctagacagaatattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaagtagagacttgaaggaagaaagcagccagattgcatcaatctagacagaatattc 440
Query: 241 tcgacagag 249
|||||||||
Sbjct: 441 tcgacagag 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
