Query= MSMg01no431_k08.b1 MSMg01no431_k08.b1 CHROMAT_FILE:
MSMg01no431_k08.b1 PHD_FILE: MSMg01no431_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:03 2005
(247 letters)
>mm_chr18_84092810_84093456
Length = 647
Score = 462 bits (239), Expect = e-135
Identities = 245/247 (99%)
Strand = Plus / Minus
Query: 1 ccctcaacttgaggacttgacatagcattcctcttactcgtagctgggatcacaggcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccctcaacttgaggacttgacatagcattcctcttactcgtagctgggatcacaggcctg 388
Query: 61 tggcacccggctttgtgtttctctatgacaaatgaaatttaattcatgctgaccttaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tggcacccggctttgtgtttctctatgacaaatgaaatttaattcatgctgaccttaagg 328
Query: 121 agtaggcaacgggccagcccttctagatcacctttatttaaggatttttaaagcactctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 327 agtaggcaacgggccagcccttctagatcacctttatttaaggatttttaaagtactctg 268
Query: 181 tcctcctgcatgtcttaaagaatgtattactcatgaggatagaggtgagctttgtgtggg 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tccacctgcatgtcttaaagaatgtattactcatgaggatagaggtgagctttgtgtggg 208
Query: 241 acacaag 247
|||||||
Sbjct: 207 acacaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no431_k08.g1 MSMg01no431_k08.g1 CHROMAT_FILE:
MSMg01no431_k08.g1 PHD_FILE: MSMg01no431_k08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:03 2005
(391 letters)
>mm_chr18_83925571_83926361
Length = 791
Score = 656 bits (339), Expect = 0.0
Identities = 378/393 (96%), Gaps = 6/393 (1%)
Strand = Plus / Plus
Query: 1 tgagtatgtcctaaggcttctctgtggtagctacacagcactgtggcaagttttgcagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 tgagtatgtcctaaggcttctctgtggtagctacacagcactgtggcaagttttgcaaaa 260
Query: 61 agtttagcttctattcaccactggaaatgatgattatacagataaatataaaaggatata 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 agtttagcttctattcaccactggaaatgatgactatacagataaatataaaaggatata 320
Query: 121 tataattaaagcataaaaataatataaatatatttacatatatattactataattatata 180
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tataattaaagcattaaaataatataaatatatttacacatatattactataattatata 380
Query: 181 aattataatatatagattgcacatatatatataaattgtacacatataaattatatatat 240
|||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 381 aattattatatatagattgca----tatatataaattgtacatatataaattatatatat 436
Query: 241 ata-a-attgtatatataaaattgtaaatatatacatatattaaagcatagttgtttcat 298
||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 437 atatatattgtatatataaaattgtaaatatatacatatattaaagcatagttgttccat 496
Query: 299 atagataatagatcagtggaaaagaaagagccaggaagtagatatagacataaactgcca 358
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 497 atagataatagatcagtggaacagaaagagccaggaagtagatataaacataaactgcca 556
Query: 359 agtgaactttgaatatatagtaagaaaaattaa 391
|||||||||||||||||||||||||||||||||
Sbjct: 557 agtgaactttgaatatatagtaagaaaaattaa 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
