Query= MSMg01no449_c15.b1 MSMg01no449_c15.b1 CHROMAT_FILE:
MSMg01no449_c15.b1 PHD_FILE: MSMg01no449_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:42 2005
(267 letters)
>mm_chr18_61994406_61995067
Length = 662
Score = 472 bits (244), Expect = e-137
Identities = 259/267 (97%), Gaps = 5/267 (1%)
Strand = Plus / Plus
Query: 1 agcttcattctgccgtactaaaaccagtgacctaatttcctggggaaacccaaatgaggg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 agcttcattctgccgtactaaaaccggtgacctaatttcctggggaaacccaaatgaggg 260
Query: 61 ggtttggataacaagcagattagaagtctggcctctttacagaagcacttgaaagacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtttggataacaagcagattagaagtctggcctctttacagaagcacttgaaagacagg 320
Query: 121 atgcgcaatggaacttaaagcaaagaaaaggaaacttgctgtagtctccgggggccccag 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 atgcgcaatggaacttaaagcaaag-----gaaacttgctgtagtctccgggggccccag 375
Query: 181 acgtcccccagacagacgtcagacatctcccaagtggggtccgccagaataccatcacac 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 376 acgtcccccagacagacgtcagacatctcccaagtggggtccgtcagaataccatcacac 435
Query: 241 agcaattaanagacaaacaaatgaacc 267
||||||||| |||||||||||||||||
Sbjct: 436 agcaattaaaagacaaacaaatgaacc 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 662
Length adjustment: 9
Effective length of query: 258
Effective length of database: 653
Effective search space: 168474
Effective search space used: 168474
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no449_c15.g1 MSMg01no449_c15.g1 CHROMAT_FILE:
MSMg01no449_c15.g1 PHD_FILE: MSMg01no449_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:42 2005
(519 letters)
>mm_chr18_62122846_62123765
Length = 920
Score = 540 bits (279), Expect = e-157
Identities = 312/325 (96%), Gaps = 7/325 (2%)
Strand = Plus / Minus
Query: 1 tttgcgag-ttcactgaagtctcaaaaaagaggaccttatttg---taactcaggacatg 56
||||| || ||||||||||||||| |||||||||||||| || | | ||||||||||
Sbjct: 322 tttgccagtttcactgaagtctcagaaaagaggacctta--tgagat-attcaggacatg 266
Query: 57 gatattttccataatattgatttccaaatcttttaaaatattttgcttctaaaatattca 116
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 gatattttccataatattgatttccaaatcttttaaaatatgttgcttctaaaatattca 206
Query: 117 ctcagtggtcacttgatctttgacaagggagctaaaaccatccagtggaaaaaagacagc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctcagtggtcacttgatctttgacaagggagctaaaaccatccagtggaaaaaagacagc 146
Query: 177 attttcaacaaatggtgctggcacaactggcggttatcatgtagaagaatgcgaattgat 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 attttcaacaaatggtgctggcacaactggcggttatcatgtagaagaatgcgaattgat 86
Query: 237 ccatttctattttcttgtactaaggtcaaatctaagtggattaaggaactccacataaaa 296
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ccatttctatctccttgtactaaggtcaaatctaagtggattaaggaactccacataaaa 26
Query: 297 ccagagacactgaaacttatagagg 321
|||||||||||||||||||||||||
Sbjct: 25 ccagagacactgaaacttatagagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
