NGGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCAACTGTGGCATATCAAAGGGCTGAGAAGCACTGAAAAA
ATATTCAAAATCCTTAATCATCAGAGAAATGCAAATCAAAACAACCCTGA
AATTCCACCTCACACGAGTCAAAATGGCTAGGATCAAAAATTCTGGTACA
GCAGATGCTAGCAAGGATGTGGAAAAAGAGAAATACTCCTCTGTTGCTGG
TGGGATTGCAAGCTGGTACAACCACTCTGGAAATCATTCTGGTGGTTCCT
CAGAAAACTGAATATAGTACTACTGCTAGATCCAGCACTACCACTCCTGG
ACATATACCCAGAAAATGTTCCAACTGCTAATAAAGACAAATGTTCCACT
ATGTTCATAGCAGCCCTATTTATAATAGCCAGAAGCTGGAAAGAACCCAG
ATGTCCCTCAACAGAGGAATGATACAGAACATGTGGTACATTTACACAAT
GGAGTACTGCACAGCTATTAAATGCAATGAATTTATGAAATTCTTAGTCA
AATGGATGAATCTGGAGGATATCAACCTGAGTGAGGTAACCCAATCACAA
AAGAATACACATGATATGCACTCACTGATAAATGGATATTAGTCCAGAAA
CTCAGAATACCCAAAATACAATTTGTCAAACACATGAAACTTCATAAAGA
ATGAATACCCTAAGTGTGGATACATTGTTCTCTTCTTAAAAAGTGGGAAC
AAN

NNTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGATGTTAATTGTCACTGGA
TATAAATGATGTGTTTTTTACACTTAAAATACATAACATTAGCACTGAAG
TTCATCATAGAATGAAAATCGTTCAAAAGAATATATAATAGAGGGGTTCA
AGAGATACAAAGATACAAAGAGAACTGTTTTTATAACTGAGAACCTGCAT
TTGAGTTGCAGCAAGACATTATAACTGTAATTGAGCTGAAAGGGACCTGC
TACCCTCTTCTGGCATTGCATGTGTGAGGTATATAAGTAATGTGCAAATA
CACATGCAGGCAAAATGCACATACACAAATAAAAAAATTTTAAGATTCAC
AATAAAAACAAAAACAAAATAATATAAATAACAAAATACATATATTAAAT
ATAACTAATCTATTTCCAAGTTTTAAAAATTAATGATCTAAGTATTTATG
GAAAACTTTGTTCAGTTTAATAAAATGTCTAATGTCCATTTGAACAGTTT
TTTTCACATGAAAAACAATATACTTAACAGGAGGCAACACCAAGATACAG
TCTATTAATAATTTTTACACCGATTATTATTATAACCACCATTATAACCC
CAATGTTATAATTGAAAAGGACAGAAAAGAAACCCAAGTTCCAAAATGAG
TTATGAAATTTTTTTTAAATAATTAATTGGCCTATAAATTTTTCTGAAAA
AAATGCTCAAAAA

Query= MSMg01no449_h05.g1 MSMg01no449_h05.g1 CHROMAT_FILE:
MSMg01no449_h05.g1 PHD_FILE: MSMg01no449_h05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:19:05 2005
         (501 letters)



>mm_chr18_18741584_18742484
          Length = 901

 Score =  922 bits (477), Expect = 0.0
 Identities = 495/501 (98%), Gaps = 1/501 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgatgttaattgtcactggatataaatgatgtgttttttacacttaaaatacataaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgatgttaattgtcactggatataaatgatgtgttttttacacttaaaatacataaca 260

                                                                       
Query: 61  ttagcactgaagttcatcatagaatgaaaatcgttcaaaagaatatataatagaggggtt 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagcagtgaagttcatcatagaatgaaaatcgttcaaaagaatatataatagaggggtt 320

                                                                       
Query: 121 caagagatacaaagatacaaagagaactgtttttataactgagaacctgcatttgagttg 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 caagagatacaaagatacaaagagaactgtttttataactgagaatctgcatttgagttg 380

                                                                       
Query: 181 cagcaagacattataactgtaattgagctgaaagggacctgctaccctcttctggcattg 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 cagcaagacattataactgtaattgagctgaaagggacctgcta-cctcttctggcattg 439

                                                                       
Query: 241 catgtgtgaggtatataagtaatgtgcaaatacacatgcaggcaaaatgcacatacacaa 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catgtgtgaggcatataagtaatgtgcaaatacacatgcaggcaaaatgcacatacacaa 499

                                                                       
Query: 301 ataaaaaaattttaagattcacaataaaaacaaaaacaaaataatataaataacaaaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 500 ataaaaaaattttaagattcacaataaaaacaaaaacaaaataatataaataacagaata 559

                                                                       
Query: 361 catatattaaatataactaatctatttccaagttttaaaaattaatgatctaagtattta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catatattaaatataactaatctatttccaagttttaaaaattaatgatctaagtattta 619

                                                                       
Query: 421 tggaaaactttgttcagtttaataaaatgtctaatgtccatttgaacagtttttttcaca 480
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggaaaagtttgttcagtttaataaaatgtctaatgtccatttgaacagtttttttcaca 679

                                
Query: 481 tgaaaaacaatatacttaaca 501
           |||||||||||||||||||||
Sbjct: 680 tgaaaaacaatatacttaaca 700


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space:   437481
Effective search space used:   437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)