CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCTGGTGTACTTTTTTTTGGGGTCACTTATCATATCATCTGCAAATA
GTGATATTTTGACTTCTTTCTTTCCAAGGTGTATCCCTTTGATCTCCTTT
TGTTGTCTAATTGCTCTGGCTAAGACTTCAAGTACTATATTGAATAGGTA
AGGAGAGAGTGGGCAGCCTTGTCTAGTCCCTGATTTTAGTGAGATTGCTT
CAAGTTTCTCTCCATTTAGTTTGATGTTGGCTACTGGTTTTCTGTATATT
GCTTTTATTATGTTTAGGTATGGGCCTTGAATTCCTGATCTTTCCAAAAC
TTTTATCATGAATGTGTGTTGGATTTTGTCAAATGTTTTCTCAGCATCTA
ATGAAATAATCATGTGGTTTTTGTCTTTGGGTTTGTTTACATAGTGGATT
ACATTGATGGATTTCCATATATAGAACCATCTCTGCATCCCTGGGATGAA
GCCTACTTGATCATGATGGATCATTGATTTGTTGGATTCTGTTTGTGAGA
ATTTTATTGAGTATTTTTTGCATCGATATTCATAAGGAAAATTGGTCTGA
AGTTCTCTTTGTTGGGTCTTTGTTTGGGTTAGGTATCAGAGTAATTGTGT
CTTCATAGAATGAATTGGGTAGAGTATCTTCTGTTTCTATTTTGTGGAAT
AGTTTGAGGCGTATTGGAATTAGGTCTTTTTTTTAAGGTCTGATAGAACT
CTGAACTAAGCCATCTGGTCCTGG

CATGATAGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTCATTGCAGAAATAGTAGATAAACT
AGTGATGAGAATGATAAGTTGATAATAGAACATTAAACATGCAAATAACA
TTTACTCTGAGAACCTTATTTTGGCTGAGTCAAAATGAGTCTTAGAAACA
ATAAATATGTATAAATGTAAATATTATAAATAAATACAATAAAATAAATG
CTATAAAACCTATTTCAGTCACATATGAGAAGAAAACAAGCCATGTGGCC
CATATTTGTCATTGAATTTCTTATTTACTTAATTATTCTTAATTACGTTG
CTCCTGTATTAAAAAAATTTGCTGAGGTTACAAGTGTTATGGAATAAACT
GATAGGTCTTAGTAATTCAAACACTTATTTAGATGTTAAATAGAAAGTAA
TTCATTTAGATAGTATAATCACATTTCCAATTCATCAATATGCAGACAGT
GCTTTGCATGTTAGAACTGCAAAAAAATCCATCAAACACCTGAAACTCTA
CAAAATAATATAAAGAAAATAACAGAGAAGACTGGTGATAAAAAATTGTT
ACAGTGATATTACTTTTTAGATTTACTATTCTGAATGTATGGCCCATTGT
CCCCATGATATTCTATACTGGTTTCTTACTAAACACCTTCATAATATCAT
CAATTGTACTGAAAATATTAAAACAAATTACAAATTGTAGGAACTGCCAT
TTATAGATATCACAGTGCTATTCCTTTTN

Query= MSMg01no451_m18.g1 MSMg01no451_m18.g1 CHROMAT_FILE:
MSMg01no451_m18.g1 PHD_FILE: MSMg01no451_m18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:10 2005
         (563 letters)



>mm_chr18_31363273_31364235
          Length = 963

 Score = 1073 bits (555), Expect = 0.0
 Identities = 561/563 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcattgcagaaatagtagataaactagtgatgagaatgataagttgataatagaacatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 201 ttcattgcagaaatagtagataaactagtgatgagaatgataagttgataatagaacata 260

                                                                       
Query: 61  aaacatgcaaataacatttactctgagaaccttattttggctgagtcaaaatgagtctta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacatgcaaataacatttactctgagaaccttattttggctgagtcaaaatgagtctta 320

                                                                       
Query: 121 gaaacaataaatatgtataaatgtaaatattataaataaatacaataaaataaatgctat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaacaataaatatgtataaatgtaaatattataaataaatacaataaaataaatgctat 380

                                                                       
Query: 181 aaaacctatttcagtcacatatgagaagaaaacaagccatgtggcccatatttgtcattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaacctatttcagtcacatatgagaagaaaacaagccatgtggcccatatttgtcattg 440

                                                                       
Query: 241 aatttcttatttacttaattattcttaattacgttgctcctgtattaaaaaaatttgctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatttcttatttacttaattattcttaattacgttgctcctgtattaaaaaaatttgctg 500

                                                                       
Query: 301 aggttacaagtgttatggaataaactgataggtcttagtaattcaaacacttatttagat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggttacaagtgttatggaataaactgataggtcttagtaattcaaacacttatttagat 560

                                                                       
Query: 361 gttaaatagaaagtaattcatttagatagtataatcacatttccaattcatcaatatgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttaaatagaaagtaattcatttagatagtataatcacatttccaattcatcaatatgca 620

                                                                       
Query: 421 gacagtgctttgcatgttagaactgcaaaaaaatccatcaaacacctgaaactctacaaa 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 gacagtgctttgcatgttagaactgcaaaaaaatccaccaaacacctgaaactctacaaa 680

                                                                       
Query: 481 ataatataaagaaaataacagagaagactggtgataaaaaattgttacagtgatattact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ataatataaagaaaataacagagaagactggtgataaaaaattgttacagtgatattact 740

                                  
Query: 541 ttttagatttactattctgaatg 563
           |||||||||||||||||||||||
Sbjct: 741 ttttagatttactattctgaatg 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)