Query= MSMg01no454_e10.b1 MSMg01no454_e10.b1 CHROMAT_FILE:
MSMg01no454_e10.b1 PHD_FILE: MSMg01no454_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:25 2005
(244 letters)
>mm_chr18_66105497_66106139
Length = 643
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 aaaacaagcaaagaagaattatcttagtgtagctttgctcccagcagcccctggaggtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaaacaagcaaagaagaattatcttagtgtagctttgctcccagcagcccctggaggtcc 384
Query: 61 atttctgtgctggatatttgaatgcctcccttttattttcacgttctgagataatgtaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atttctgtgctggatatttgaatgcctcccttttattttcacgttctgagataatgtaac 324
Query: 121 tctgcatttttaagaaaggtgaacattcttttccagcagatcatgtttttgttctatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctgcatttttaagaaaggtgaacattcttttccagcagatcatgtttttgttctatttt 264
Query: 181 taaaaccgatattaacagatatcttgtgatttcttcattctttgggggggggggacaaga 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 263 taaaaccgatattaacagatatcttgtgatttcttcattcttt-ggggggggggacaaga 205
Query: 241 gcta 244
||||
Sbjct: 204 gcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no454_e10.g1 MSMg01no454_e10.g1 CHROMAT_FILE:
MSMg01no454_e10.g1 PHD_FILE: MSMg01no454_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:25 2005
(240 letters)
>mm_chr18_66076283_66076922
Length = 640
Score = 424 bits (219), Expect = e-123
Identities = 234/239 (97%)
Strand = Plus / Plus
Query: 1 aataaataggaaacaggaagtgagtgtgcagggatcacagggaaggcggtagtctcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaataggaaacaggaagtgagtgtgcagggatcacagggaaggcggtagtctcatct 260
Query: 61 ccacatggagagccagcctgggctgggacagagtcccagatgtaccagccagcaagccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ccacatggagagccagcctgggctgggacagagtcccagatgtaccagccaacaagccac 320
Query: 121 ccctgaactaactgtacacgtgggattccaggaaccctttccagaaattaccctgtaaag 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 ccctgaactaactatacacgtgggattccaggaaccctttccagaaattaccctggaaag 380
Query: 181 gaacacaggacttacacttcctgacttagaaacttactatgaaacagtcatggtgctga 239
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacacaggacttacacttcccgacttagaaacttactatgaaacagtcatggtgctga 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
