Query= MSMg01no457_b13.b1 MSMg01no457_b13.b1 CHROMAT_FILE:
MSMg01no457_b13.b1 PHD_FILE: MSMg01no457_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:09 2005
(518 letters)
>mm_chr18_24813453_24814370
Length = 918
Score = 491 bits (254), Expect = e-143
Identities = 344/414 (83%), Gaps = 64/414 (15%)
Strand = Plus / Minus
Query: 105 tgggctacataatgagttctagggctgagtgtaaagtgagattgtctcaaaaaggaaaga 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 918 tgggctacataatgagttctagggctgagtgtaaagtgagattgtctcaaaaaggtaaga 859
Query: 165 aagaaagaaagaaagaaagaaagaaagaaagaaagagagagagagagagagagagagaga 224
||||||||||||||||||| || ||| |||||||||||||||||||||||||||
Sbjct: 858 aagaaagaaagaaagaaag------ag--agagagagagagagagagagagagagagaga 807
Query: 225 gagaggaaggaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa 284
|||||||||||||||||
Sbjct: 806 gagaggaaggaaggaag------------------------------------------- 790
Query: 285 gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa 344
| ||| ||| ||| ||| ||||||||||||||||||||||||||||||
Sbjct: 789 ------------g-aaggaaggaaggaaggaagaaagaaagaaagaaagaaagaaagaaa 743
Query: 345 gaaagaaagaaagaaagaaagaaacctatgtccctttactgtggatgttaaaggttttaa 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaaagaaagaaagaaagaaagaaacctatgtccctttactgtggatgttaaaggttttaa 683
Query: 405 aggaagattggctgctacaagctaatgtcaagtctgggtgctgttctctgacagaaagaa 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aggaagattggctgctacaagctaatgtcaagtctgggtgctgttctctgacagaaagaa 623
Query: 465 gtggagccaggacggacctaacagacctttactttcaaggtggtatagagggtg 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gtggagccaggacggacctaacagacctttactttcaaggtggtatagagggtg 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 145
Number of extensions: 50
Number of successful extensions: 50
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42
Number of HSP's successfully gapped: 6
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_b13.g1 MSMg01no457_b13.g1 CHROMAT_FILE:
MSMg01no457_b13.g1 PHD_FILE: MSMg01no457_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:10 2005
(428 letters)
>mm_chr18_24772756_24773583
Length = 828
Score = 828 bits (428), Expect = 0.0
Identities = 428/428 (100%)
Strand = Plus / Plus
Query: 1 acttatatattcaacaggatgaccaggtaactagtgtttgtgttctctcatacatgacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttatatattcaacaggatgaccaggtaactagtgtttgtgttctctcatacatgacat 260
Query: 61 cctccctccttctgcccctacttcctccatcccccatgcctccatcctcctctccaccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctccctccttctgcccctacttcctccatcccccatgcctccatcctcctctccaccct 320
Query: 121 cctcctccttttcccttcagaaaagagaagtctcccagggatagcaaccaaacatggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcctccttttcccttcagaaaagagaagtctcccagggatagcaaccaaacatggcat 380
Query: 181 attaaattgcagtttagaaactagaatcatgttttgcttagtgacatgtcttaatgtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attaaattgcagtttagaaactagaatcatgttttgcttagtgacatgtcttaatgtaaa 440
Query: 241 ctactccttgatgatacaattttagggatgttacaattcaaaccagagtaattcacaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctactccttgatgatacaattttagggatgttacaattcaaaccagagtaattcacaggg 500
Query: 301 taatctcctcggcagttctgttagatgctctttctcattatgaacaccacataaccactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatctcctcggcagttctgttagatgctctttctcattatgaacaccacataaccactt 560
Query: 361 ccttggtcatcaggcacagagttattagaggaaaactgataactaaaacccataaaactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttggtcatcaggcacagagttattagaggaaaactgataactaaaacccataaaactg 620
Query: 421 ccacatgg 428
||||||||
Sbjct: 621 ccacatgg 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
