TTTTCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCTAGAGGAT
CCGCGGAATTCTTACTGTTAACACTCTATTTTTAAATTATAATAAAATAT
TTGTTATTTTAATATCCATTTTTCTTTTAGATTTTTCTAAAACAATCATG
TGTGTGCATGACTGTCTACGTATCAGTGTTTTCCATGCACATGCACACTC
CTGCAGAGGTCAGAAGAAAGCACTGAATACCCTGGAGCTTGAGTTACAGG
CAGTTTTGAGCCTCTGATGTGGGTCCTAGAAATTAAATTCAGATTTTCTG
TAAAACCAATCTATATTATTCAACAAGGAATGATCCATTCAGCCTGGGTA
TCTAGCTTTGAAAGAGATTTATTTTTACTGTCTCATAAGTAATTATTTAT
AAGATTTCATGATCACAAACCTGTGAAAGAGCCATCATTCTATGTGCTTC
CTTAGAGAAGGACACTGAGGCTCAATGGTAACCATAAAATCTCATTCCTG
AGAANATGTCCGCCCATTGGAGATAGCACCATCTTTCATACCCAGTTTCT
TTTTATTTTTCCACTGATGTGGACATAAGTGGTATAGTCTGCTTAGAAAC
TTGACCTGGTAAATTCACTTGCTTAGATGCCTTAAATAATAAGAATATAT
GTGAAGTATTTTACAATGGAAAAGCCACCGGGACATTGCTTAAACCTTGT
AAGTATTACTAGGCCCCCATGTAATTATAAATTTTTCTTTTTGAGATCTC
CCGGGAAAAAATTAAAACN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTAACAGCAAAATTCCCCAAACCCCAACCCCAACCC
CACCAGATTTCTAAAGTCCCTGGGGCCTCCAGTCTCTTGAGGATTAGGTG
CATCTTCACTGACTGAACCCAGACACCGCAGTCCTCTGTTGTGTATGTGT
TGGGGGCTTCATATCAGCTGGTGTATGCTGTCTGATTGGTGGCTCAGTGT
CGGATATATCTTGGGGGTCGAGTTTAATTGAGACTGCTGGTCTTCCTACA
GGCTTGCCCTCCTTCTCAGTTTCTTCTTGCTTTTGCCTCATTCATCCACA
GGGGTCAGCAGCTTCTGTCCGTTGATTGGGAGCAAATATCTGCATCTGAC
TCTTTCAGCTGCTCGTTTGGGCTTCCAGAGGGCAGCCATGATAGATCCCT
TTTTGTGAGTGCTCCAAAGCCTCAATAATAGTGAAGTCTTGGAGCCTGCC
CTTGAGTCAGATCCCACTTTGGGCCTGTGGCTGGAACTTCTTTTACTCAT
GCTTGTCTCCATTTCCATGGTGATGGTCTAACTGGCCGTCTGTGTGTATA
AAAATGAAAGTAGATACATATTTGTCTCCTTGCACAAAGCTCAAGTCCAA
GTGGATCATGTATCTCAATATAAAACCCGATACACTGAATCTAATAAAAG
AGAAATTGGTGAATAGCCTTGTACTCGCTGCCCCAGGGTGAAATTTTT

Query= MSMg01no458_n07.b1 MSMg01no458_n07.b1 CHROMAT_FILE:
MSMg01no458_n07.b1 PHD_FILE: MSMg01no458_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:32 2005
         (526 letters)



>mm_chr18_87866584_87867509
          Length = 926

 Score =  978 bits (506), Expect = 0.0
 Identities = 517/521 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaattcttactgttaacactctatttttaaattataataaaatatttgttattttaata 65
           |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcttactggaaatactctatttttaaattataataaaatatttgttattttaata 265

                                                                       
Query: 66  tccatttttcttttagatttttctaaaacaatcatgtgtgtgcatgactgtctacgtatc 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tccatttttcttttagatttttctaaaacaatcatgtgtgtgcatgactgtctacgtatc 325

                                                                       
Query: 126 agtgttttccatgcacatgcacactcctgcagaggtcagaagaaagcactgaataccctg 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agtgttttccatgcacatgcacactcctgcagaggtcagaagaaagcactgaataccctg 385

                                                                       
Query: 186 gagcttgagttacaggcagttttgagcctctgatgtgggtcctagaaattaaattcagat 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gagcttgagttacaggcagttttgagcctctgatgtgggtcctagaaattaaattcagat 445

                                                                       
Query: 246 tttctgtaaaaccaatctatattattcaacaaggaatgatccattcagcctgggtatcta 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tttctgtaaaaccaatctatattattcaacaaggaatgatccattcagcctgggtatcta 505

                                                                       
Query: 306 gctttgaaagagatttatttttactgtctcataagtaattatttataagatttcatgatc 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gctttgaaagagatttatttttactgtctcataagtaattatttataagatttcatgatc 565

                                                                       
Query: 366 acaaacctgtgaaagagccatcattctatgtgcttccttagagaaggacactgaggctca 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 acaaacctgtgaaagagccatcattctatgtgcttccttagagaaggacactgaggctca 625

                                                                       
Query: 426 atggtaaccataaaatctcattcctgagaanatgtccgcccattggagatagcaccatct 485
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 626 atggtaaccataaaatctcattcctgagaaaatgtccgcccattggagatagcaccatct 685

                                                    
Query: 486 ttcatacccagtttctttttatttttccactgatgtggaca 526
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttcatacccagtttctttttatttttccactgatgtggaca 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space:   472656
Effective search space used:   472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)