XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TATAATTCCTTTTCTGACTCTGTGAAAGAAAATATTTGAATTCTATGGAA
GATATCTCCCAGTCTTTTTCTGTTCTCCACTCTGGTGAATCCACTATTTT
TTAATTTACTTCTAAGATGATAATAAAATAGCATTTCTCATTTCTCATTT
CTTTTCCAAACTCATCCTGCCCTTCATCAAATTCAATGCATAAGCTACCC
ATCAGTTATCTATTTACCTATGTAACCTCACTATTTCCTATATTTTATCT
ATCAGTCAGTCTGTCTGTCTACTTACCTACACGCCTAATCCATCTCCTGC
TGTGTGGTTGGAATGCTTGCCCCTCCTGAAAACTAATTGCTATTGAACCA
TTACAAAGAGGTGAGGTATTTAAGAAGTTGCTATCCTGCAAAGACTCAAT
CCTGAGACTTCTGGTCTCAATCAAGAACTCTTGTAATAATTTTCATACTT
TGTTTTCCAGTTCACAAGTCAGACAGCGCTTCCTCCTCTCAAAACATGCT
GCATTCAGGCAGGTCCTGCTCTGTAACTAAACTTGATACGGTCTACTTAA
TTCTAAATCACGTGAAAGAAATTCCATATTCTTGATAATTTCTCAGCCTG
TGAACATCTCTTAAATTTCCCAAAAAAATTGTGGTTGGGCATTTTATAAT
TTTGAAAAAAGGTTTCTGTTTCCTATTAATTAACCTTTGCTAAACCACCT
CCTTATATTTT

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXACGCAGTTGAATCCTTCTCAACAGTCTGTG
TTACGGGAACACTTTATTACCACCATTCCCCAGCTGAAGAGTTCTGAATT
CAAGCAGTTGAATCCTTCTCAACAGTCTGTTTTACGGGAACACTTCATTA
CCATGACCCGCAGTTCTGGTTCCGGAATGAGGGATCTTCCTTGCGCCGGT
GATGGTAACCGTCCCAGGTCTTCTCGTCCCAGGTCTTCTCGTCCCAGGTC
TTCTCGTCCCGTCTTGGGTTTTCTCGTCCCAGGTCTTCTCGTCCCGTCCC
GAGTTTTCTTGTCCTGGGTTTTTTCGTCCCGGGTTCTTTCTTCCCGGGTT
TCCGGCACCAACTCTTACCCGCGTTCTCGCGACCGGCCAGGATAGACACA
ACAAACCGGAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCTGGA
GCAAGAAGCCAGAGCCCTAGCAAGAGAGAGCATGAAAGCCATAAATAGAA
TCCTTACCTGAATCCCTGATTGAGATATAGCTTTGACCCGACTAGACATA
CTCCCGATCTCTTAAGAAGAAATCTCCTTTTTTCTTTAATCCACAACCCT
ATCCCTTATTTAGCCCCCCTGTATTCAATGTCTACCCATATGTGGCTCAC
CCTCCCCTCTTACAGGGAATATACCCCCCCCCAGGCCGTTTTATTTTCCG
GTGGTTATCCCTCCTTTCTTTCC

Query= MSMg01no459_d19.b1 MSMg01no459_d19.b1 CHROMAT_FILE:
MSMg01no459_d19.b1 PHD_FILE: MSMg01no459_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:05 2005
         (548 letters)



>mm_chr18_18113248_18114195
          Length = 948

 Score = 1015 bits (525), Expect = 0.0
 Identities = 528/529 (99%)
 Strand = Plus / Minus

                                                                       
Query: 20  ttttctgactctgtgaaagaaaatatttgaattctatggaagatatctcccagtcttttt 79
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ttttctgactctgtgaaagaaaatatttgaattctatggaagatatctcccagtcttttt 689

                                                                       
Query: 80  ctgttctccactctggtgaatccactattttttaatttacttctaagatgataataaaat 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctgttctccactctggtgaatccactattttttaatttacttctaagatgataataaaat 629

                                                                       
Query: 140 agcatttctcatttctcatttcttttccaaactcatcctgcccttcatcaaattcaatgc 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agcatttctcatttctcatttcttttccaaactcatcctgcccttcatcaaattcaatgc 569

                                                                       
Query: 200 ataagctacccatcagttatctatttacctatgtaacctcactatttcctatattttatc 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ataagctacccatcagttatctatttacctatgtaacctcactatttcctatattttatc 509

                                                                       
Query: 260 tatcagtcagtctgtctgtctacttacctacacgcctaatccatctcctgctgtgtggtt 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tatcagtcagtctgtctgtctacttacctacacgcctaatccatctcctgctgtgtggtt 449

                                                                       
Query: 320 ggaatgcttgcccctcctgaaaactaattgctattgaaccattacaaagaggtgaggtat 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggaatgcttgcccctcctgaaaactaattgctattgaaccattacaaagaggtgaggtat 389

                                                                       
Query: 380 ttaagaagttgctatcctgcaaagactcaatcctgagacttctggtctcaatcaagaact 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttaagaagttgctatcctgcaaagactcaatcctgagacttctggtctcaatcaagaact 329

                                                                       
Query: 440 cttgtaataattttcatactttgttttccagttcacaagtcagacagcgcttcctcctct 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cttgtaataattttcatactttgttttccagttcacaagtcagacagcgcttcctcctct 269

                                                            
Query: 500 caaaacatgctgcattcaggcaggtcctgctctgtaactaaacttgata 548
           ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 268 caaaacatgctgcattcaggcaggttctgctctgtaactaaacttgata 220


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)