Query= MSMg01no461_e10.b1 MSMg01no461_e10.b1 CHROMAT_FILE:
MSMg01no461_e10.b1 PHD_FILE: MSMg01no461_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:49 2005
(340 letters)
>mm_chr18_88968844_88969583
Length = 740
Score = 586 bits (303), Expect = e-172
Identities = 321/327 (98%), Gaps = 1/327 (0%)
Strand = Plus / Minus
Query: 1 catctcacttttaaatatttcctctgtatattattggtttgttcttttattcttctgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 catctcacttttaaatatttcctctgtatattattggtttgttcttttattcttctgttt 287
Query: 61 ttcctagaaccagtttaagaatttcataaagaacaatatacgaagtacagttatttactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttcctagaaccagtttaagaatttcataaagaacaatatacgaagtacagttatttactt 227
Query: 121 ttttattcatatactatttttggtgttgcactaattactattctattgctgtaataaaac 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 226 ttttattcatatactatttttggtgttgcactaattactattctatcgctgtaataaaac 167
Query: 181 tccatggccaaggcaacttaaaaggaatgtatttaattgagtttatgatttcagagtagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 accatggccaaggcaacttaaaaggaatgtatttaattgagtttatgatttcagagtagt 107
Query: 241 ggc-tatattgtggtggagcaaaggcatgatgacaaaaaccactgagagttcaagcagga 299
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 ggcaaacattgtggtggagcaaaggcatgatgacaaaaaccactgagagttcaagcagga 47
Query: 300 agcagagagacagagagagagagagag 326
|||||||||| ||||||||||||||||
Sbjct: 46 agcagagagagagagagagagagagag 20
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_e10.g1 MSMg01no461_e10.g1 CHROMAT_FILE:
MSMg01no461_e10.g1 PHD_FILE: MSMg01no461_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:49 2005
(471 letters)
>mm_chr18_88819893_88820763
Length = 871
Score = 350 bits (181), Expect = e-100
Identities = 193/197 (97%)
Strand = Plus / Plus
Query: 275 gagactcaaacaatgagctctgactttgcagtgatataagcagcttgtgccaatggcttt 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gagactcaaacaatgagctctgactttgcagtgatataagcagcttgtgccaatggcttt 534
Query: 335 ggagagttgggagtctgtggtcctttatcttcacacagtcactagagacttgcacccttt 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggagagttgggagtctgtggtcctttatcttcacacagtcactagagacttgcacccttt 594
Query: 395 caggctttggaaaatcagttacctgctacctacttggtgtctgcaggacacaagatggac 454
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 595 caggctttggaaaaacagttacctgctacctacttggtgtctgcagaacacaagatgaac 654
Query: 455 ctctggagcttctttga 471
||| |||||||||||||
Sbjct: 655 ctcgggagcttctttga 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
