Query= MSMg01no462_f07.b1 MSMg01no462_f07.b1 CHROMAT_FILE:
MSMg01no462_f07.b1 PHD_FILE: MSMg01no462_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:18 2005
(499 letters)
>mm_chr18_44803549_44804446
Length = 898
Score = 920 bits (476), Expect = 0.0
Identities = 491/496 (98%), Gaps = 1/496 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctcagcagcaggcacaagctaaagtaagcagaccagagtaaaacagcagatgg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcagcagcaggcacaagctaaagtaagcagaccagagtaaaacagcagatgg 263
Query: 64 ttccaatttattatatagcccgttgtttagtcttttaaaaaaaaaatacagaacctttat 123
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 264 ttccaatttattatatagcccgttgtttagtctta-aaaaaaaaaatacagaacctttat 322
Query: 124 agtctttcgatttctttacaaagaccaccccagggcctcaaggtatccttgtttttcatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agtctttcgatttctttacaaagaccaccccagggcctcaaggtatccttgtttttcatt 382
Query: 184 ctgtgagatcagaggttaactaaccctcctccactgcttcatgtaagcaagtttccttga 243
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctgtgagatcagaggttaaccaaccctcctccactgcttcatgtaagcaagtttccttga 442
Query: 244 gtcaacctagcccctagccttccctaacgtctctctttgacttccctctcatcgtccctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtcaacctagcccctagccttccctaacgtctctctttgacttccctctcatcgtccctt 502
Query: 304 aaagatggtttgcctctttccactgctttgcttcctggagtttgttacctctatccaact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaagatggtttgcctctttccactgctttgcttcctggagtttgttacctctatccaact 562
Query: 364 acagtttaaaaatactcattggtgggaccagcaaaatggcttagtagctgccatgcctgc 423
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 563 acagtttaaaaatactcattggtgggaccagcaaaatggcttagtagctgccgtgcctgc 622
Query: 424 tgccaaggctgaggactctaggttcaatccccagattggtagtagggaggattgagtgct 483
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 623 tgccaaggctgaggactctaggttcaatccccagattggcagtagggaggattgagtgct 682
Query: 484 tcaagttgccctgtga 499
||||||||||||||||
Sbjct: 683 tcaagttgccctgtga 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 898
Length adjustment: 10
Effective length of query: 489
Effective length of database: 888
Effective search space: 434232
Effective search space used: 434232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_f07.g1 MSMg01no462_f07.g1 CHROMAT_FILE:
MSMg01no462_f07.g1 PHD_FILE: MSMg01no462_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:19 2005
(313 letters)
>mm_chr18_44986623_44987335
Length = 713
Score = 542 bits (280), Expect = e-158
Identities = 306/316 (96%), Gaps = 3/316 (0%)
Strand = Plus / Minus
Query: 1 ctctgtaccataatctaaaaatggattgtggcccttgcatagacaggctctctaatcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctctgtaccataatctaaaaatggattgtggcccttgcatagacaggctctctaatcttg 327
Query: 61 tgctgtcgtttgcaacatttgaaagtattttagttgctcttgccaaaagtaatgagctac 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgctgtcctttgcaacatttgaaagtattttagttgctcttgccaaaagtaatgagctac 267
Query: 121 tacgaaaatgaacattatcttgtttgttgtcattccttcggcactcacaagtattttttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 266 tacgaaaatgaacattatcttgtttgttgtcattccttcggcactcacaagtgttttttt 207
Query: 181 ctaatgctgcctggtctacagatcaagttccaggacagcgatggctacatagaaaaaccc 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ctaatgttgcctggtctacagatcaagttccaggacagcgatggctacatagaaaaaccc 147
Query: 241 tgtctcataaaggaagaaagaaagaaagaaaggaaggaaggaag---gaaggaaggaagg 297
||||||| |||||||||||||||||||||||| ||| ||| ||| |||||||||||||
Sbjct: 146 tgtctcaaaaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaggaaggaagg 87
Query: 298 aaggaaggaaggaagg 313
||||||||||||||||
Sbjct: 86 aaggaaggaaggaagg 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 13
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
