Query= MSMg01no463_k10.b1 MSMg01no463_k10.b1 CHROMAT_FILE:
MSMg01no463_k10.b1 PHD_FILE: MSMg01no463_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:09 2005
(338 letters)
>mm_chr18_56270852_56271589
Length = 738
Score = 601 bits (311), Expect = e-176
Identities = 332/339 (97%), Gaps = 2/339 (0%)
Strand = Plus / Plus
Query: 1 ctgacagaaaagctgccctgccacataacagcaacttttatacaacactgccatttcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgacagaaaagctgccctgccacataacagcaacttttatacaacactgccatttcatt 260
Query: 61 ttacattttcctctcgatgtgcactgaactcataaatcaaaatttcccctatatgtgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacattttcctctcgatgtgcactgaactcataaatcaaaatttcccctatatgtgata 320
Query: 121 agaatatcagttctttcaaatgagagagaaaagttttaaatacaatatgtgtgtatatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 321 agaatatcagttctttcaaatgagagagaaaagttttaaatacaatatgtgtggaaatgg 380
Query: 181 aaaaattagaaaaactttatcgatcacttttgcaaatggtacctttttctctctgagac- 239
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaattagaaaaactgtatcgatcacttttgcaaatggtacctttttctctctgagacg 440
Query: 240 tngattattgatatctctattactaagctgacaatgaaaacctctataaatctaagttat 299
| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 t-gaatactgatatctctattactaagctgacaatgaaaacctctataaatctaagttat 499
Query: 300 ccagaccaaaccttaaatacaaagtataggcttaggttt 338
|||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccagaccaaaccttaaatacaaagtataggcttaggttt 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_k10.g1 MSMg01no463_k10.g1 CHROMAT_FILE:
MSMg01no463_k10.g1 PHD_FILE: MSMg01no463_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:09 2005
(239 letters)
>mm_chr18_56410529_56411168
Length = 640
Score = 412 bits (213), Expect = e-119
Identities = 233/240 (97%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 1 ctggaatc-cggncaggaagtatttcaaagctctggctggttatactcccgatgaggttg 59
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctggaatcacggtcaggaagtatttcaaagctctggctggttatactcccgatgaggttg 381
Query: 60 gaaattcagactcaatggctgaactcccgaggacaaacaggtcaaagcctctattaagtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaaattcagactcaatggctgaactcccgaggacaaacaggtcaaagcctctattaagtt 321
Query: 120 atgaaagtgaaataaatcccttggccaagttcatgttggctcttcgtggaatatttttgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 320 atgaaagtgaaataaatcccttggccaagttcatgttggctcttcgtggaagaggcttgg 261
Query: 180 tagaaagagcttagagcactcatcacatttcagcattccctggatgggacagacgtcgtg 239
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tagaaagagcttagaacactcatcacatttcagcattccctggatgggacagacgtcgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 640
Length adjustment: 9
Effective length of query: 230
Effective length of database: 631
Effective search space: 145130
Effective search space used: 145130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
