NNNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCC
GCGGAATTCAGCATTGCTTTACCTAATATTTCAGCTGTGCTATCTGCTGA
TGGAAAGTTTCATAGCAAGAATAGCACAAAGCAAGCAGTATTTGGGTAGA
TTCAAAATTTCTGCCAAACTGCCCATAGCTTTTATCTTTCCCTGTCAGTC
ACTGCGAGCATCAGTAGTGCCTGTGGTGGCGAGACTGACACCCACTGATA
TCATCCCTGATTGTACTCCCTCCACCCCCCGTCTCAACGAGGGATGGATG
TCTGTATTCAACTTGCGTGGAGAGATGAATCTATCTAACCTGGGTTCATC
TAACCTGGGTTAGATAGATGCATCTATCTAACCTGGGTTAGCTATCTCCT
TACCCTGGGTTCATGAAAGGGCAGTGACAATTTCACTTTGCCAAGGGGAG
ATGGCAGAATATTTGGTGACAGGAAGCTCCAGGGGAAGGGAGAATGGCAG
AGAGCTTATCCTACTTTGTGGCCAGCTTAGCTCAGTGAACTCTGCATTTA
GTGCATTTTGTGAGCTGGACTGTGCAATGCCAAAAAGTAAAATAAAATAT
GTAAATACAAAGGGTAAAAAGGTCAAAGTTTATTAGAAAGGACATTGGTA
CATAAAATAATTTCAAAATTAGCTATTTACTGTAGAAGAAACCCTAAATG
GAAGTTTATACAGGTGGGATAGTACCTTGTCTATAGAACACATTTCCT

NNNNTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACTGTAACATGTCACATTAATGA
ACCTATAGAAGATTAAAGTGAGTGAAAGGTGCTATTCATGAAAAAGACAA
ATGCTGCAGCTTCACTCATCTCTCATTATCTAAAGTTGTGAAATTTATAG
AATCAAGGACTCTTAATAGTGAGTGGAGCAAAACATTTTAATTAACAGGC
ATAAAGTTCCAGCTAGGCAGGAGAAGTGGGTTCTACGACCTCTCACAAGC
TGCACTGTAGGGTACAGACAAAAATTTGTTAATATTTGTAGATACAATAT
TACAATGGCTACTTCAGCTTGTTTCTTTGGACCATTTGCTTGGAAAATTG
CTTTCCAGCCTTTCACTCTGAGGTAGTGTCTGTCATTTTCCTTGATGTGC
ATTTCCCGTTAGCAGCAAAATGTTGGGTCCTGTTTGTGTAGCCAGTCTCT
TACTCTGTGCCTTTTTATTGGGGAGTTGAGTCCATTGATATTAAGAGATA
TTANAGAAAAGTAATTGTTGCTTCCTGTTATTTTTGTTGTTAAAGTTGGG
ATTCTGTTCTTGTGGCTGTCTTCTTTTAGGTTTGTTGAAGAATTACTTTC
TTGCTTTTTCTAGGGTGTAGTTTCTGTTCTTGTGTTGGGGTATTCCCTTT
TTGCCCTTTGAGGGCTGGATTTGTGGAAAGATACTGTGTGAAATTAGTTT
TGTCAG

Query= MSMg01no463_p22.b1 MSMg01no463_p22.b1 CHROMAT_FILE:
MSMg01no463_p22.b1 PHD_FILE: MSMg01no463_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:36 2005
         (613 letters)



>mm_chr18_16460302_16461314
          Length = 1013

 Score = 1108 bits (573), Expect = 0.0
 Identities = 600/609 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagcattgctttacctaatatttcagctgtgctatctgctgatggaaagtttcat 64
           ||||||||||||||  ||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 813 gaattcagcattgcaatacctaacatttcagctgtgctgtctgctgatggaaagtttcat 754

                                                                       
Query: 65  agcaagaatagcacaaagcaagcagtatttgggtagattcaaaatttctgccaaactgcc 124
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 753 agcaagaatagcacaaagcaagcggtatttgggtagattcaaaatttctgccaaactgcc 694

                                                                       
Query: 125 catagcttttatctttccctgtcagtcactgcgagcatcagtagtgcctgtggtggcgag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 catagcttttatctttccctgtcagtcactgcgagcatcagtagtgcctgtggtggcgag 634

                                                                       
Query: 185 actgacacccactgatatcatccctgattgtactccctccaccccccgtctcaacgaggg 244
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 actgacacccactgagatcatccctgattgtactccctccaccccccgtctcaacgaggg 574

                                                                       
Query: 245 atggatgtctgtattcaacttgcgtggagagatgaatctatctaacctgggttcatctaa 304
           ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 573 atggatgtctgtattcaacttgcatggagagatgaagctatctaacctgggttcatctaa 514

                                                                       
Query: 305 cctgggttagatagatgcatctatctaacctgggttagctatctccttaccctgggttca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cctgggttagatagatgcatctatctaacctgggttagctatctccttaccctgggttca 454

                                                                       
Query: 365 tgaaagggcagtgacaatttcactttgccaaggggagatggcagaatatttggtgacagg 424
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 453 tgaaagggcagtgacaatttcactttgccaaggggagatggcagaacatttggtgacagg 394

                                                                       
Query: 425 aagctccaggggaagggagaatggcagagagcttatcctactttgtggccagcttagctc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aagctccaggggaagggagaatggcagagagcttatcctactttgtggccagcttagctc 334

                                                                       
Query: 485 agtgaactctgcatttagtgcattttgtgagctggactgtgcaatgccaaaaagtaaaat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agtgaactctgcatttagtgcattttgtgagctggactgtgcaatgccaaaaagtaaaat 274

                                                                       
Query: 545 aaaatatgtaaatacaaagggtaaaaaggtcaaagtttattagaaaggacattggtacat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaaatatgtaaatacaaagggtaaaaaggtcaaagtttattagaaaggacattggtacat 214

                    
Query: 605 aaaataatt 613
           |||||||||
Sbjct: 213 aaaataatt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)