Query= MSMg01no464_b01.b1 MSMg01no464_b01.b1 CHROMAT_FILE:
MSMg01no464_b01.b1 PHD_FILE: MSMg01no464_b01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:42 2005
(339 letters)
>mm_chr18_61174024_61174761
Length = 738
Score = 578 bits (299), Expect = e-169
Identities = 329/339 (97%), Gaps = 2/339 (0%)
Strand = Plus / Plus
Query: 1 cagaatggagctgctgcacacagtaggcacccaactaatgtttagctcactcagctacta 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 cagaatggagctgctgcacacagtaggcacacaactaatgtttagctcactcagctacta 260
Query: 61 gccaatcgcccagtcaatcagtggtgtatccaataccttaaaatagtcctggacctcatc 120
|||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||
Sbjct: 261 gccaattgcccagtcaatcagtgct-tatccaataccttaaaatagtcctggaccgcatc 319
Query: 121 ttgttttctcaacccagagagggcgttgtttagtccttccgtttcacggatgaggaaacc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 320 ttgttttctcaacccagagagggcgttgtttagtccttccgtctcacggatgaggaaacc 379
Query: 181 aaaggccaggggaggtaggttactcacttaaggccgtgcagttagcatgtgacaccaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaaggccaggggaggtaggttactcacttaaggccgtgcagttagcatgtgacaccaggg 439
Query: 241 acattattcagtcctcatagacttcccataaacgtagcataactccttttcttgggatga 300
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acag-agccagtcctcatagacttcccataaacgtagcataactccttttcttgggatga 498
Query: 301 aagtgtatgcagttaggaggtttgggagaggggaaggaa 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagtgtatgcagttaggaggtttgggagaggggaaggaa 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 738
Length adjustment: 9
Effective length of query: 330
Effective length of database: 729
Effective search space: 240570
Effective search space used: 240570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_b01.g1 MSMg01no464_b01.g1 CHROMAT_FILE:
MSMg01no464_b01.g1 PHD_FILE: MSMg01no464_b01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:42 2005
(399 letters)
>mm_chr18_61357762_61358560
Length = 799
Score = 756 bits (391), Expect = 0.0
Identities = 394/395 (99%)
Strand = Plus / Minus
Query: 1 actgcttggtttagaagaagaatctgaaacctttgaatccatttccacttacaagaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 actgcttggtttagaagaagaatctgaaacctttgaatccatttccacttacaagaacct 536
Query: 61 tcggagcaagtccggcatcaaggttttccgcttcatagcccctctctactacataaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tcggagcaagtccggcatcaaggttttccgcttcatagcccctctctactacataaacaa 476
Query: 121 agagtgctttaaatcagctttgtacaagaaagctcttaacccagtcttggtaaaggcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agagtgctttaaatcagctttgtacaagaaagctcttaacccagtcttggtaaaggcagc 416
Query: 181 ttggaaaaaggcagcaaagagaaaactcaaagaggaaatggtgacctttcgtggggaccc 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 415 ttggaaaaaggcagcaaagagaaaactcaaagaagaaatggtgacctttcgtggggaccc 356
Query: 241 ggatgaagtttcaatgcagctttcccatgatcccttggaggtgcacactatcgtgatcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ggatgaagtttcaatgcagctttcccatgatcccttggaggtgcacactatcgtgatcga 296
Query: 301 ctgtagtgccatacagtttttagacacagcaggaatccacacactgaaagaagttcgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ctgtagtgccatacagtttttagacacagcaggaatccacacactgaaagaagttcgccg 236
Query: 361 ggattatgaagccgttgggatccaggttttactgg 395
|||||||||||||||||||||||||||||||||||
Sbjct: 235 ggattatgaagccgttgggatccaggttttactgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
