Query= MSMg01no464_b18.b1 MSMg01no464_b18.b1 CHROMAT_FILE:
MSMg01no464_b18.b1 PHD_FILE: MSMg01no464_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:45 2005
(270 letters)
>mm_chr18_47590008_47590677
Length = 670
Score = 466 bits (241), Expect = e-136
Identities = 259/265 (97%), Gaps = 2/265 (0%)
Strand = Plus / Minus
Query: 4 gaattctccac-ttgtctgaaaaaggtgttggctttcatttaaaattcaacttaatttcc 62
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gaattctccacatt-tctgaaaaaggtgttggctttcatttaaaattcaacttaatttcc 409
Query: 63 ctttgagatagtccgaggttgcctgttcttgaaggggtagagggttgccttcgaggcctt 122
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctttgagatagtcagaggttgcctgttcttgaaggggtagagggttgccttcgaggcctt 349
Query: 123 tggatggtgactccagagctctttctcttggtcaaggtaccgtaggtgcagttcttggag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tggatggtgactccagagctctttctcttggtcaaggtaccgtaggtgcagttcttggag 289
Query: 183 gtggaggaacgaaggcagctgttatacactcagtcgtcctgaaagacggctctatgttcc 242
||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 288 gtggaggaacgaaggcagctgcaatacactcagtcgtcctgaaagacggctctacgttcc 229
Query: 243 ctaacaaatacttggctttagatcc 267
|||||||||||||||||||||||||
Sbjct: 228 ctaacaaatacttggctttagatcc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_b18.g1 MSMg01no464_b18.g1 CHROMAT_FILE:
MSMg01no464_b18.g1 PHD_FILE: MSMg01no464_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:45 2005
(376 letters)
>mm_chr18_47434314_47435089
Length = 776
Score = 681 bits (352), Expect = 0.0
Identities = 370/376 (98%)
Strand = Plus / Plus
Query: 1 cctgggagttcaaattggtcttggacatttgatggatgcaaggaaggctgctggttcact 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgggagttcaaattggtcttggatatttgatggatgcaaggaaggctgctggttcact 260
Query: 61 ttcaaggcctgaatttctcaacatctgataagaattattcagttacaggccatgattgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaaggcctgaatttctcaacatctgataagaattattcagttacaggccatgattgca 320
Query: 121 aggtctgacgttgcaaaagaccaggtgcgaagtgggtttccttcctgaagggtaaggtta 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 aggtctgacgttgcaaaagaccaggtgctaagtgggtttccttcctgaagggtaaggtta 380
Query: 181 agctagatgacatttgccttctgagcaattctctcctggtctgtgctgctcagtattcct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 agctagatgacatttgccttctgagcaattctctcctggtctgtgctgctcaatattcct 440
Query: 241 gtttgtatcatagatgagcagatgtcaaaggtggaggaattctgcagacttttctgttct 300
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 gtttgcatcatagatgagcagatgtcaaaggtggaggaattctgcaaacttttctgttct 500
Query: 301 accctgtgttgaatcatggcggggctgggtggggaactgcattacaaagctctgggtttt 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 accctgtgttgaatcatggcggggctgggtggggaactgcattgcaaagctctgggtttt 560
Query: 361 aagacagtcttgaaga 376
||||||||||||||||
Sbjct: 561 aagacagtcttgaaga 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
