Query= MSMg01no464_h07.b1 MSMg01no464_h07.b1 CHROMAT_FILE:
MSMg01no464_h07.b1 PHD_FILE: MSMg01no464_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:14 2005
(146 letters)
>mm_chr18_42773006_42773551
Length = 546
Score = 267 bits (138), Expect = 2e-76
Identities = 144/146 (98%)
Strand = Plus / Minus
Query: 1 acacaaagatgtgcacacatagaaatccaacagtagttgcaagtgcgtttatccctggca 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 346 acacaaagatgtgcacacatagaaatccaacaggagttgcaagtgcgtttatccctggca 287
Query: 61 gtggtagaacatctgcccagatgctgctgtgagcttcatggtgggttcttctatcccgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtggtagaacatctgcccagatgctgctgtgagcttcatggtgggttcttctatcccgtt 227
Query: 121 tgttccctctctcctgactgaggccc 146
||||||||||||||| ||||||||||
Sbjct: 226 tgttccctctctcctcactgaggccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 146
Length of database: 546
Length adjustment: 8
Effective length of query: 138
Effective length of database: 538
Effective search space: 74244
Effective search space used: 74244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_h07.g1 MSMg01no464_h07.g1 CHROMAT_FILE:
MSMg01no464_h07.g1 PHD_FILE: MSMg01no464_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:14 2005
(245 letters)
>mm_chr18_42581501_42582146
Length = 646
Score = 323 bits (167), Expect = 6e-93
Identities = 182/187 (97%), Gaps = 1/187 (0%)
Strand = Plus / Plus
Query: 58 tatatatatataat-aaagtagtttctgtactagaaacagaagtcaccctagtaattttg 116
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 258 tatatatatataaagaaagtagtttctgtactagaaacagaagtcaccgtagtaattttg 317
Query: 117 aagcacgggggattatttaacattagaaattaggtacccataaaattattggaaaggttg 176
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aagcacaggggattatttaacattagaaattaggtacccataaaattattggaaaggttg 377
Query: 177 aaatgtggggtctaggttaggcatttggaataatttatgaagtactgcaaaatgtcagag 236
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaatgtgggctctaggttaggcatttggaataatttatgaagtactgcaaaatgtcagag 437
Query: 237 aagtgat 243
|||||||
Sbjct: 438 aagtgat 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
