ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTGCAGAATTGGAGGCAGAAAAAGTGTAAGAGTCATAGGAGATGAAAAAC
AATAAAACAAAACCTTCTACGTGAACATGTGAAAAGCTCATATGAGGTCA
CAGAGACTGAGGTATCATGTACAGGACCTGCACAGACCCTTCACCAGGTC
CTCTGTGCATGCATATGGCTTCTATTTTAATGACATTACAAGATTCCTAA
ATATGCCACAGGTGCCTTGTACTGGATTTGTTTTCTTCTGTTGATTTCTC
TTGTCCAACTTCAATGAAATACTTTTTGTTTATCTTTTATATTCTATTTT
GATGTTATTTTGTTGTTATCCCTTGAAAGCCTATTATTTTTCAGTGAGAC
ACAAAGGGAATGGATCCAGATACTAGGTGTGCTGGGGAGGAACTGAAAGA
AGTAAAAGAGAGGGAAAATTAATCAGGAAAATAATCTATTTTCAATAAAA
GGAAAAATGACTAGGAAACTAGCAGGCCCCTCTCAAGTGAAGGTATTCAA
GTAAGCAATAAACATAGTATCATATCAGCATTTTTATGAAAATTACAACA
AAACAACAGGTAAGATCTGTGTCCCAAGAGAACCTTACTTTAGTGAGTTT
TAGTGATGATTTGAAGGGAAGCAGTCTCAAAGTTACTATTTAAGCTAGGA
AATTTAACAGTGAGAATN

NCCCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAAACCTGATAAACAGCT
TCGGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAATGGCCTTT
CTCTATACAAAGAATAAACAGGCTGAGAAAGAAATTAGAGAAACAACACC
CTTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCTAACTA
AGGAGGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAAGAAAGAA
ATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGG
CAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGAT
TCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTGGAA
GGAGCAATTTGCAAATTTGTCTGGAATAACAAAAAACCTAGGTTACCAAA
AAGTCTTCTCAAGGATAAAAGAACTTCTGGCGGAATCGCCATGCCAGACC
TAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTAT
AGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAA
CCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCC
AGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGTCACAACTGGNTG
TTATCATGTAGAA

Query= MSMg01no477_n08.b1 MSMg01no477_n08.b1 CHROMAT_FILE:
MSMg01no477_n08.b1 PHD_FILE: MSMg01no477_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:23 2005
         (675 letters)



>mm_chr18_18170228_18171302
          Length = 1075

 Score =  791 bits (409), Expect = 0.0
 Identities = 409/409 (100%)
 Strand = Plus / Minus

                                                                        
Query: 267  acttcaatgaaatactttttgtttatcttttatattctattttgatgttattttgttgtt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 acttcaatgaaatactttttgtttatcttttatattctattttgatgttattttgttgtt 1016

                                                                        
Query: 327  atcccttgaaagcctattatttttcagtgagacacaaagggaatggatccagatactagg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 atcccttgaaagcctattatttttcagtgagacacaaagggaatggatccagatactagg 956

                                                                        
Query: 387  tgtgctggggaggaactgaaagaagtaaaagagagggaaaattaatcaggaaaataatct 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  tgtgctggggaggaactgaaagaagtaaaagagagggaaaattaatcaggaaaataatct 896

                                                                        
Query: 447  attttcaataaaaggaaaaatgactaggaaactagcaggcccctctcaagtgaaggtatt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  attttcaataaaaggaaaaatgactaggaaactagcaggcccctctcaagtgaaggtatt 836

                                                                        
Query: 507  caagtaagcaataaacatagtatcatatcagcatttttatgaaaattacaacaaaacaac 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  caagtaagcaataaacatagtatcatatcagcatttttatgaaaattacaacaaaacaac 776

                                                                        
Query: 567  aggtaagatctgtgtcccaagagaaccttactttagtgagttttagtgatgatttgaagg 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775  aggtaagatctgtgtcccaagagaaccttactttagtgagttttagtgatgatttgaagg 716

                                                             
Query: 627  gaagcagtctcaaagttactatttaagctaggaaatttaacagtgagaa 675
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  gaagcagtctcaaagttactatttaagctaggaaatttaacagtgagaa 667


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)