Query= MSMg01no478_f12.b1 MSMg01no478_f12.b1 CHROMAT_FILE:
MSMg01no478_f12.b1 PHD_FILE: MSMg01no478_f12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:03 2005
(605 letters)
>mm_chr18_61745883_61746886
Length = 1004
Score = 1079 bits (558), Expect = 0.0
Identities = 595/616 (96%), Gaps = 16/616 (2%)
Strand = Plus / Minus
Query: 1 taccactaagaaatgatttctatataaaaccctcgtgctaaacttactacttttctactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 taccactaagaaatgatttctatataaaaccctcgtgctaaacttactacttttctactt 690
Query: 61 ccattgctgcattaaaaagaccaactctcatgactaactcccaaactagaaatactccat 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 689 ccattgctgcattaaaaagaccaagtctcatgactaactcccaaactagaaatactccat 630
Query: 121 gtactttccaaattgtcctgatccaccacagttctctctcctcatgagggaacccagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gtactttccaaattgtcctgatccaccacagttctctctcctcatgagggaacccagggc 570
Query: 181 tgctacctttaatggctggtcatttttttttttttttttttacttaagacagaataaact 240
||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 569 tgctacctttaatggctggtc-----tttttttttttttttacttaagacagaataaaca 515
Query: 241 ttttacctcttagtaacacaaacatcccataaaggccatttggtctattcccttccaaac 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gtctacctcttagtaacacaaacatcccataaaggccatttggtctattcccttccaaac 455
Query: 301 ctgaggtgacctaac---------tacatttcagaccatttcttgactttttaaaaacaa 351
||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 454 ctgaggtgacctaactacatttcatacatttcagaccatttcttgactttttaaaaacaa 395
Query: 352 aaccagcacgcaaaccactagcatgacaacccccacgcttctgtcagtaatatactgctc 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aaccagcacgcaaaccactagcatgacaacccccacgcttctgtcagtaatatactgctc 335
Query: 412 cccctccctttcctcttcaagcactggatttttcctttgggcttcatgggatatataaaa 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cccctccctttcctcttcaagcactggatttttcctttgggcttcatgggatatataaaa 275
Query: 472 ttttcctactacttactttttattacaaatgttttcaagaataaaattgtaaagacatta 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttttcctactacttactttttattacaaatgttttcaagaataaaattgtaaagacatta 215
Query: 532 ttacacatttataatcatcatttaaaaaaa--aaatgtattttcacctgttactaaaaac 589
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 214 ttacacatttataatcatcatttaaaaaaaataaatgtattttcacctgttactaaaaac 155
Query: 590 ttctcatttgggagga 605
||||||| ||||||||
Sbjct: 154 ttctcatctgggagga 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1004
Length adjustment: 10
Effective length of query: 595
Effective length of database: 994
Effective search space: 591430
Effective search space used: 591430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_f12.g1 MSMg01no478_f12.g1 CHROMAT_FILE:
MSMg01no478_f12.g1 PHD_FILE: MSMg01no478_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:03 2005
(397 letters)
>mm_chr18_61575104_61575900
Length = 797
Score = 745 bits (385), Expect = 0.0
Identities = 394/397 (99%)
Strand = Plus / Plus
Query: 1 acactgtacaacagagttgagcactggtttgagctaggtccctacacagccacacctaaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 acactgtacaacagagttgagcactggtttgagttaggtccctacacagccacacctaaa 260
Query: 61 ataatcctactgaatgcaagcccaagctaggcattagacgggtggctactgacttggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataatcctactgaatgcaagcccaagctaggcattagacgggtggctactgacttggtgg 320
Query: 121 caaagagggggaatcgaatgtgactcaaggaagtcatgaaggctaccgctgatgacctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaagagggggaatcgaatgtgactcaaggaagtcatgaaggctaccgctgatgacctcc 380
Query: 181 aagtctgttgctattgcctcggttccactgcctctctcttgcttcaacagccacaacagg 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtctgttgctattgccttggttccactgcctctctcttgcttcaacagccacaacagg 440
Query: 241 ctcctccatgctcttccttgagagtgcactaactgcttctgggtccctccacctgcagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcctccatgctcttccttgagagtgcactaactgcttctgggtccctccacctgcagca 500
Query: 301 gtcagaaggttagagttgccacacaaaatccagatcctgctcctatcctaccccagcatt 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 gtcagaaggttagagttgccacacaaaaaccagatcctgctcctatcctaccccagcatt 560
Query: 361 ctttcatgatgactcatgggcttctattaaaggagag 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttcatgatgactcatgggcttctattaaaggagag 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
