TGCGGCCGCTAAANGAATCACATTTCAAACCAGGGGCGCGGAANTCNCAC
TTTCCGAAACAGAAGGGNAGAGAAGCACTTGAAAAAATGTTCAACATCCT
TAATCTTCAGGCAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACA
CCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCG
AGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGTTAGTGCAGGC
TTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAACTGGAC
ATATTTCTTCCTTAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGA
AGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAG
CCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACA
GAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTC
AGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACC
TGGAGAGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCACAC
AATATGTATTCACTGATAAGTGGATATTAGCCCCAAACCTATGATACCCA
AGATATAAGATATAATTTGCTAAACACATGAAACTCAAGAAGAATGAAGA
CTGAAGTGTGGACACTATGCCCCTCCTTAA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTTCAACTAACATTAAAGAATATATCAACTGTATG
TCTTAAGGTTTAAATTTACTCTAACTAAAAAACAAACAAACAAAAAGATT
GGGAAACACTGTGCTGGTATAGCTATTATCAAGCTAACATACATATGCAA
ACAACTCGAGTTAATCATTTTCTTCTTGGTATGAACTAATAATTTCTTTG
AGCAAAAGCACAAGAAAATTTTAAAATTAAAACACAGCAAATATAAACCC
ATGAATTATATATCACAGTATTTTATAGAAGCAGGGGTATCATGACAGCT
ATCATACCCATTGGCCTTTTACTGATCTAGACCTGTCTCTATTAGTGTAA
ACCAAACCACTAAGGAAAAGATTCACTCAGATATGCATACAACATGTATT
CTGTCATAAAGTAAAACCTACTATACCCTAAAGAAGATAATGACTCTCAC
CACATTGATAGCAAAAAGGCTGTTATCATCCCAGATTTCTGATGAAATTG
CTTGTCCAATGAGCAGCATGTCCTCTGCAAGCAGTTCCAGAACTCTTATT
ATCATTTCTCTGCTGCCTAGACATAAAAATGGGAGAAGCACAAGGGAAAA
CAAAGTTACTTGATTTTCAGTTAATTAGCTGGACCCTCTAGCTAGGCATG
TTTCCAAATTCTTATTTCCCCATCCTTGGTGTTTTTA

Query= MSMg01no478_k15.g1 MSMg01no478_k15.g1 CHROMAT_FILE:
MSMg01no478_k15.g1 PHD_FILE: MSMg01no478_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:26 2005
         (640 letters)



>mm_chr18_89158538_89159577
          Length = 1040

 Score = 1230 bits (636), Expect = 0.0
 Identities = 639/640 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttcaactaacattaaagaatatatcaactgtatgtcttaaggtttaaatttactctaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 cttcaactaacattaaagaatatatcaactgtatgtcttaaggtttaaatttactctaac 781

                                                                       
Query: 61  taaaaaacaaacaaacaaaaagattgggaaacactgtgctggtatagctattatcaagct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 taaaaaacaaacaaacaaaaagattgggaaacactgtgctggtatagctattatcaagct 721

                                                                       
Query: 121 aacatacatatgcaaacaactcgagttaatcattttcttcttggtatgaactaataattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aacatacatatgcaaacaactcgagttaatcattttcttcttggtatgaactaataattt 661

                                                                       
Query: 181 ctttgagcaaaagcacaagaaaattttaaaattaaaacacagcaaatataaacccatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ctttgagcaaaagcacaagaaaattttaaaattaaaacacagcaaatataaacccatgaa 601

                                                                       
Query: 241 ttatatatcacagtattttatagaagcaggggtatcatgacagctatcatacccattggc 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttagatatcacagtattttatagaagcaggggtatcatgacagctatcatacccattggc 541

                                                                       
Query: 301 cttttactgatctagacctgtctctattagtgtaaaccaaaccactaaggaaaagattca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cttttactgatctagacctgtctctattagtgtaaaccaaaccactaaggaaaagattca 481

                                                                       
Query: 361 ctcagatatgcatacaacatgtattctgtcataaagtaaaacctactataccctaaagaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctcagatatgcatacaacatgtattctgtcataaagtaaaacctactataccctaaagaa 421

                                                                       
Query: 421 gataatgactctcaccacattgatagcaaaaaggctgttatcatcccagatttctgatga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gataatgactctcaccacattgatagcaaaaaggctgttatcatcccagatttctgatga 361

                                                                       
Query: 481 aattgcttgtccaatgagcagcatgtcctctgcaagcagttccagaactcttattatcat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aattgcttgtccaatgagcagcatgtcctctgcaagcagttccagaactcttattatcat 301

                                                                       
Query: 541 ttctctgctgcctagacataaaaatgggagaagcacaagggaaaacaaagttacttgatt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttctctgctgcctagacataaaaatgggagaagcacaagggaaaacaaagttacttgatt 241

                                                   
Query: 601 ttcagttaattagctggaccctctagctaggcatgtttcc 640
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttcagttaattagctggaccctctagctaggcatgtttcc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)