NCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCACTAGCTCTGGCCTATATCCAAACCAGGACTTATGTCTCTCC
CTTAATAAACTATCTCATTTTCTGTTCCCGTTGCTTTGTCTTTGTTCAAA
TCTTTGTTCTAAGACTTCAGAACAAAGGCATCTCAGCAGGTGGCTCTCAA
CTCAGGTCATAACAGGAGTATCAACTGTTCTATGACTCTTGCAAACCACA
ATATGCCCAAACAACACTTATGTGAAGCAGGACACACTCTACAGAAGGTT
CCTCCTTTCTTGTTTCTCTATTCACCTCTCTTCCATCTGAGAGATCACTT
TCCAGGGAGCTTATCAGGATCCAAAAACTTCCTCTCTGGGTGTTCTTCTG
GCTATCTACCTCAATTGTGACTCATGATGATGGGTTGTTTGACAGCATAT
GCTATCAAGGATCCATCTTCCTTTGGTGCCTGCATTGTGATTCTTCTACA
AATATATTGGAATGGCTCCTAGAGCCAGAACATGTCAATTCAAATCCTAG
TTCTCCTTTGTACTGAGGTAACTACATTAAACCCATGACTTAGTTTTCTC
CTAAGTGTAAGAAGGCTGCTGTGGTGTCTGGCTCACAGGGATGTGAGAGG
ATTAACAAAGAGTGAGGCATCTTCTTTTTCATTTGATTTTTTTTCTTACA
TTTATTCTGTTCATGTNGTTTTCTACCCAAACTCCTTCTAA

CGCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTTCAGGAATTCTTTACCCCATTTTTAAATTGGGTTA
CTTGAGTTCTTGATATTTAATTTCTTAGGTTTTTTTTTTTAAATAAATCT
TGGATATCAGCCCTCTGTCAGATGTATGGTTGGTGAAGACTGCTTTCTGA
ATCTGTAATCTGCCACCTGTCTTATTGACAGTGTCCTTTGTTTTACACAA
GTTTTGAAGTTTCATGAGGTTTCATTTAAGTGTTGATCTTAGAGCCTGAG
CCATTGGTGTCCTGTTCAGGAAATTTTCTCTTGTGCTAATTCATTCAAGT
GTATTTCCAACTTTTTTTAAAATGAGATTTAGTGCATCAGTTTAATATTG
AGGTTCTTGATCAACTTGGACTTCAGTTTTGTGTTCGTTGATAAATATGG
ACCTATTTTCATTCTTCTACATGTAGTCTCCTAGTTACACCAGCACTATT
TGTCAAAAATGATTTCTTTTTTTCTGTTGTATGGTTTTGGCTTCTTTTTA
AAAAATCAAGTGTTCATAGGTGTATGGACTTATCTTCAATTGAAGTCTAT
TGATCAGTGTGTCTGTTTCTGTACCAATACCATGCAGTTTTTTATCACTA
TTGCTCTATATTACAGCTTGAGGTCAGGGATGGTGATTCCTCCTGAAGTC
TTCTATTTTGGGGGATTGTTTTGGCTATCT

Query= MSMg01no480_c24.b1 MSMg01no480_c24.b1 CHROMAT_FILE:
MSMg01no480_c24.b1 PHD_FILE: MSMg01no480_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:25 2005
         (642 letters)



>mm_chr18_8366477_8367517
          Length = 1041

 Score = 1187 bits (614), Expect = 0.0
 Identities = 632/638 (99%), Gaps = 1/638 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcactagctctggcctatatccaaaccaggacttatgtctctcccttaataaac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcactagctctggcctatatccaaaccaggacttatgtctctcccttaataaac 264

                                                                       
Query: 65  tatctcattttctgttcccgttgctttgtctttgttcaaatctttgttctaagacttcag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatctcattttctgttcccgttgctttgtctttgttcaaatctttgttctaagacttcag 324

                                                                       
Query: 125 aacaaaggcatctcagcaggtggctctcaactcaggtcataacaggagtatcaactgttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacaaaggcatctcagcaggtggctctcaactcaggtcataacaggagtatcaactgttc 384

                                                                       
Query: 185 tatgactcttgcaaaccacaatatgcccaaacaacacttatgtgaagcaggacacactct 244
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 385 tatgactcttgcaaaccacaatatgcccaaacaacacttgtgtgaagcaggacacactct 444

                                                                       
Query: 245 acagaaggttcctcctttcttgtttctctattcacctctcttccatctgagagatcactt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagaaggttcctcctttcttgtttctctattcacctctcttccatctgagagatcactt 504

                                                                       
Query: 305 tccagggagcttatcaggatccaaaaacttcctctctgggtgttcttctggctatctacc 364
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 505 tccagggagcttatcaggatccaaaaacttcctctttgggtgttcttctggctatctacc 564

                                                                       
Query: 365 tcaattgtgactcatgatgatgggttgtttgacagcatatgctatcaaggatccatcttc 424
           ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||
Sbjct: 565 tcaattgtgactcatgatgatgggttgtttgacagcatatgctatcacggattcattttc 624

                                                                       
Query: 425 ctttggtgcctgcattgtgattcttctacaaatatattggaatggctcctagagccagaa 484
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 625 ctttggtgcctgcattgtgattcttctacaaatatattggaatggctc-tagagccagaa 683

                                                                       
Query: 485 catgtcaattcaaatcctagttctcctttgtactgaggtaactacattaaacccatgact 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 catgtcaattcaaatcctagttctcctttgtactgaggtaactacattaaacccatgact 743

                                                                       
Query: 545 tagttttctcctaagtgtaagaaggctgctgtggtgtctggctcacagggatgtgagagg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tagttttctcctaagtgtaagaaggctgctgtggtgtctggctcacagggatgtgagagg 803

                                                 
Query: 605 attaacaaagagtgaggcatcttctttttcatttgatt 642
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 804 attaacaaagagtgaggcatcttctttttcatttgatt 841


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space:   651592
Effective search space used:   651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)