Query= MSMg01no482_c09.b1 MSMg01no482_c09.b1 CHROMAT_FILE:
MSMg01no482_c09.b1 PHD_FILE: MSMg01no482_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:00 2005
(573 letters)
>mm_chr18_24889998_24890970
Length = 973
Score = 915 bits (473), Expect = 0.0
Identities = 491/497 (98%)
Strand = Plus / Plus
Query: 9 gaattcagcctttctccattccctccattccctgaccatgctctgctctccactccatgc 68
|||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcagccagtgtcctttccctccattccctgaccatgctctgctctccactccatgc 268
Query: 69 tcagccccactccaacctctattccaagccctctctacctgcagaggctagtttccatgt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcagccccactccaacctctattccaagccctctctacctgcagaggctagtttccatgt 328
Query: 129 gcccagtgctatcccccaacccatcccaaccccatctcaaccccagaggttgttccacta 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gcccagtgctatcccccaacccatcccaaccccatctcaaccccagaggttgttccacta 388
Query: 189 agtctggcctagagtaatccttgccctttctgtctagaatcatgcctttttcagatgttc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agtctggcctagagtaatccttgccctttctgtctagaatcatgcctttttcagatgttc 448
Query: 249 cttcccttacagttgtggtaatgtgtgtaaactttcggccttgaggacagcatgtgttgg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cttcccttacagttgtggtaatgtgtgtaaactttcggccttgaggacagcatgtgttgg 508
Query: 309 ataggctcctgttgtcagccatctctctgctcagaagtgctttagtctacactctcagcc 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ataggctcctgttgtcagccatctctctgctcagaagtgctttagtctacactctcagcc 568
Query: 369 tcttccttccttgttaaaaattcctttgctttatactcattttctaaacattctgtcctt 428
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 569 tcttcctttcttgttaaaaattcctttgctttatactcattttctacacattctgtcctt 628
Query: 429 cctgtcctcctttccctctctcccttactctttttcattgtttgagagaggctctcatgt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cctgtcctcctttccctctctcccttactctttttcattgtttgagagaggctctcatgt 688
Query: 489 agtccaggattgcctga 505
|||||||||||||||||
Sbjct: 689 agtccaggattgcctga 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_c09.g1 MSMg01no482_c09.g1 CHROMAT_FILE:
MSMg01no482_c09.g1 PHD_FILE: MSMg01no482_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:00 2005
(348 letters)
>mm_chr18_24994583_24995330
Length = 748
Score = 642 bits (332), Expect = 0.0
Identities = 344/348 (98%), Gaps = 1/348 (0%)
Strand = Plus / Minus
Query: 1 aggttcttatagcccgtacccagtgacacacctacttcaacagggccgcatcttctaaca 60
||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||
Sbjct: 645 aggttcttatagcccgtacccagtgacacacctactt-aacagggccacaccttctaaca 587
Query: 61 gtgccactccctaggccaagcatatacaaaccatcacaaactccatctcgaaggtgtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gtgccactccctaggccaagcatatacaaaccatcacaaactccatctcgaaggtgtcat 527
Query: 121 tcactcattacccaaacagtcttgcctccctctccatcccgagcacatgtgaagatccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tcactcattacccaaacagtcttgcctccctctccatcccgagcacatgtgaagatccta 467
Query: 181 cctctgcctctacttatatagttcttagggaggaagccaggggtcaagggcacagttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cctctgcctctacttatatagttcttagggaggaagccaggggtcaagggcacagttgct 407
Query: 241 cttttccagccccagggggagaagctatctagcaggaaagcttagcacgttttgagaaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 406 cttttccagccccagggggagaagctatctagcaggaaagcttagcacattttgagaaaa 347
Query: 301 gaacctgagggcccacggttgtgatggacccaggaaagtctttgtagg 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gaacctgagggcccacggttgtgatggacccaggaaagtctttgtagg 299
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
