NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGTATATACTTGAAACAGCACCGATGAAAATGACAAGATG
CTGGCCTGCATGTCCAAGCTCAGATATATTGATGCTACTGCTGCTGCTGC
TGCTGATGATGATGATGACGATGACAACGACAACAGTGATGATGACAACA
AGGACTATGTAAAAATAAGTTTTATTCTCCAGATGTAATTGTTGTCTTAG
ACTCTCACTGCTGAAATAAGCTCACCATTTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTCT
CTCTTCCTGAATTCTGGCTGGATGTGTTCGACTCATGCTTTTCTGGATCA
TGTTCCTTTCTAAGTTTACTGATTTAAACTGTCTTTTCCCTACTTCTCTC
TGAATTGCTCTGCTTGGCCTGAAACTAACTCTGGCAGTTTGTTCTAAATT
TCTGGCTACCTCTCACTCTATGGATTGTTGTCTTTACCTGCAACCTGTTT
CTGTAAAACTCTCCCAGCAAAACTGCCTCTTTTCCCCCTGCCCCTCTCTC
TGTCCTGCTCTCTTGAATGCTGGGTATATACTATCTCTAACTCATTCTGT
CAAATCTTTTACTAATTCTGTGATTTGTCTGCCCCTGAATTAGATGTCAC
TTTTAAACATTGCTCATTCCTCTAAAAAATAAACTTAACACATTGTTTGG
TATTAAAGCACG

CATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTACCCAATATTAATATCTCTGCAACC
AAAATCTGTGTGCATGATGACCAAATTCTAGGAAAGGCCTTCTCTTTTGT
TACTAATGTCTTCTTTTAAAATTATTATTATTATTATTATTATTATTATT
ATTATTACTGTGTATGGTGTTTTGGAAATCCTTGGCCCAGGGAATGGCAT
TATTAGGAGGTATGGTCATGTTGGAGTGGATGTGACCTTGTTGGAGGAAA
TATGTCACTGTGTGTTTGGGCATTGAGACCCTTCTCCTAGCTCCCTGGAA
TCCATTCTTTTCCTATTTGCCTTTGGAATAAGATGTAGACTCTCATTTCC
TCCTGTGTCATGCCTGTCTAGACACTGCTATACTCCCACCCTGATGATAA
TGGACTGAACCTGTAAGCCAGACCCAATAAAATGTTGTCATATATATGAA
TACATATATATATTCATATATATATTCCTTTGTTTTTAATTATGAATAAT
GACTATTGAAATCACCACTCAGGGACTCCTTTTCAATTATTAAGTCATGA
ATATAACAATCAAAATGACTAGGATGTTTACTTATATCCCAGGTTGCTCC
TCAGTACTTTACATCTATTTAATTATACTCTCACAAACATCAGTAGAAGA
TCAGTAGCATTCTTGTCCCCACTTGACAAATAAGTCAGGATTTGAAACTA
TGAATTTTCN

Query= MSMg01no484_h20.g1 MSMg01no484_h20.g1 CHROMAT_FILE:
MSMg01no484_h20.g1 PHD_FILE: MSMg01no484_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:05 2005
         (688 letters)



>mm_chr18_51194629_51195718
          Length = 1090

 Score = 1205 bits (623), Expect = 0.0
 Identities = 671/705 (95%), Gaps = 30/705 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttacccaatattaatatctctgcaaccaaaatctgtgtgcatgatgaccaaattctagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tttacccaatattaatatctctgcaaccaaaatctgtgtgcatgatgaccaaattctagg 256

                                                                       
Query: 61  aaaggccttctcttttgttactaatgtcttcttttaaaattattattattattatt---- 116
           ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
Sbjct: 257 aaaggccttttcttttgttactgatgtcttcttttaaaattattattattattatttatt 316

                                                                       
Query: 117 ---------attattattattattattactgtgtatggtgttttggaaatccttggccca 167
                    |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 attattattattattattattattattactgtgtatggtgttttggaaatccttggccca 376

                                                                       
Query: 168 gggaatggcattattaggaggtatggtcatgttggagtggatgtgaccttgttggaggaa 227
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gggaatggcattattaggaggtatggtcatgttggagtggatgtgaccttgttggaggaa 436

                                                                       
Query: 228 atatgtcactgtgtgtttgggcattgagacccttctcctagctccctggaatccattctt 287
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atatgtcactgtgtgtttgggcattgagacccttctcctagctccctggaatccattctt 496

                                                                       
Query: 288 ttcctatttgcctttggaataagatgtagactctcatttcctcctgtgtcatgcctgtct 347
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttcctatttgcctttggaataagatgtagactctcatttcctcctgtgtcatgcctgtct 556

                                                                       
Query: 348 agacactgctatact-----cccaccctgatgataatggactgaacctgtaagccagacc 402
           |||||||||||||||     ||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 agacactgctatactatactcccaccctgatgataatggactgaacctgtaagccagacc 616

                                                                       
Query: 403 caataaaatgttgtcatatatatgaatacatatatatattcatatatatattcctttgtt 462
           |||||||||||||||||||||||||||||||||||||||||            |||||||
Sbjct: 617 caataaaatgttgtcatatatatgaatacatatatatattc------------ctttgtt 664

                                                                       
Query: 463 tttaattatgaataatgactattgaaatcaccactcagggactccttttcaattattaag 522
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tttaatcatgaataatgactattgaaatcaccactcagggactccttttcaattattaag 724

                                                                       
Query: 523 tcatgaatataacaatcaaaatgactaggatgtttacttatatcccaggttgctcctcag 582
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tcatgaatatcacaatcaaaatgactaggatgtttacttatatcccaggttgctcctcag 784

                                                                       
Query: 583 tactttacatctatttaattatactctcacaaacatcagtagaagatcagtagcattctt 642
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tactttacatctatttaattatactctcacaaacatcagtagaagatcagtagcattctt 844

                                                        
Query: 643 gtccccacttgacaaataagtcaggatttgaaactatgaattttc 687
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gtccccacttgacaaataagtcaggatttgaaactatgaattttc 889


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1090
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1080
Effective search space:   732240
Effective search space used:   732240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)