Query= MSMg01no488_b05.b1 MSMg01no488_b05.b1 CHROMAT_FILE:
MSMg01no488_b05.b1 PHD_FILE: MSMg01no488_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:52 2005
(670 letters)
>mm_chr18_45894937_45896006
Length = 1070
Score = 1259 bits (651), Expect = 0.0
Identities = 663/667 (99%)
Strand = Plus / Plus
Query: 4 ggaattcctcatattcaaagtgaaaaaaataatgtagatcattaagactcggtactagca 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcatattaaaagtgaaaaaaataatgtagatcattaagactcggtactagca 263
Query: 64 agactgtgtttttcttctcttaaagtgccacactccttccctctggtggtgtcattatga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agactgtgtttttcttctcttaaagtgccacactccttccctctggtggtgtcattatga 323
Query: 124 caccttttaaatattttgttaaaatcttatggatttttattattttaatatttttaaact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caccttttaaatattttgttaaaatcttatggatttttattattttaatatttttaaact 383
Query: 184 tccttttaaactatctgattctaatgggacataattcacatgtaggataaaccccagcaa 243
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 384 tccttttaaactatctgattctaatgggacacaattcacatgtaggataaaccccagcaa 443
Query: 244 gatacaaactataccttcttttgaaaactaaaacatctgcttttaaaatagtctcaacgt 303
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gatacaaaccataccttcttttgaaaactaaaacatctgcttttaaaatagtctcaacgt 503
Query: 304 tgtttttctacccaggcaattttaatgtgtgatatagaactaagttgctgggtaaatggg 363
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 504 tgtttttctacccaggcaattttaatctgtgatatagaactaagttgctgggtaaatggg 563
Query: 364 agtctaattcccattgtagatgctaaataagtggaaacaattcaattacagtattaatag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtctaattcccattgtagatgctaaataagtggaaacaattcaattacagtattaatag 623
Query: 424 gtaaagctttgggaaattattagggataggtaaggtctatcaggatagagttcccattat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtaaagctttgggaaattattagggataggtaaggtctatcaggatagagttcccattat 683
Query: 484 tcaatataaaggaagtacaaggagagaacacacacatatgcacacacacacacataaata 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcaatataaaggaagtacaaggagagaacacacacatatgcacacacacacacataaata 743
Query: 544 tacgtgcaaacacatacacatcttgcatctactctgtgatatccttgggactctgtcagc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tacgtgcaaacacatacacatcttgcatctactctgtgatatccttgggactctgtcagc 803
Query: 604 aaaaaaagccattggaatgggacttgaacctaagaccagaactatgaacaaagaatcatg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaaaaaagccattggaatgggacttgaacctaagaccagaactatgaacaaagaatcatg 863
Query: 664 aaccaaa 670
|||||||
Sbjct: 864 aaccaaa 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_b05.g1 MSMg01no488_b05.g1 CHROMAT_FILE:
MSMg01no488_b05.g1 PHD_FILE: MSMg01no488_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:53 2005
(612 letters)
>mm_chr18_46018341_46019352
Length = 1012
Score = 953 bits (493), Expect = 0.0
Identities = 535/549 (97%), Gaps = 4/549 (0%)
Strand = Plus / Minus
Query: 1 ttgcatattcagccagaagagttattattcagtccatagaggggaaatattaattatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttgcatattcagccagaagagttattattcagtccatagaggggaaatattaattatgtg 488
Query: 61 gatttttgaggcagctaattatgatgtattgtgggtatcactatta-ctggaagcaaagg 119
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 487 gatttttgaggcagctaattatgatgtattgtgggtatcacta-tagctggaagcaaagg 429
Query: 120 aagtttctatctatatgattaaagacctcagaaatgtctccaggtcaaaagatattttct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aagtttctatctatatgattaaagacctcagaaatgtctccaggtcaaaagatattttct 369
Query: 180 gagaattgatagaaggtgcagaatttgaagcataaaataagttaaggcctcatttccgtg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 368 gagaattgatagaaggtgcagaatttgaagcataaaataagttaaggcctcatttctgag 309
Query: 240 ctgccattttacccgaatgaatactttgtttcaaaactcggagatgctgtttttatcagc 299
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 308 ctgccattttacccgaatgaatactttgtttcaaatctcagagatgctgtttttatcagc 249
Query: 300 aaggtcttataaactgtacttaggggagatataccttggtaataggagactgacggtagg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaggtcttataaactgtacttaggggagatataccttggtaataggagactgacggtagg 189
Query: 360 aagcttaacaagaaggaaggcccaagtctggataccggaaacccacttagaaggggaaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 188 aagcttaacaagaaggaaggcccaagtctggataccggaaacccacttagaagtggaaca 129
Query: 420 aaataatcatgggaggtcaagggagggaggaacctgagttggagaggggaggtggaaggt 479
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 128 aaataatcatgggaggccaagggagggaggaacctgagtcggagaggggaggtggaaggc 69
Query: 480 gaaaaggagggacaggatcaggtgtagggagaaacatgagagact-ccaagagggccagg 538
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 68 aaaaaggagggacaggatcaggtgtagggagaaacatgagagactcccaa-tgggccagg 10
Query: 539 agaatgaat 547
|||||||||
Sbjct: 9 agaatgaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
