NNNNNNNNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCAAGGTTCCTTCCTAAGCATAGTAAAAGCAATATA
CAGCAAACATCAAACTAAATGTAGAGACACTTGAAGCAATCCCACTAAAA
TCAGGGACTAGACAAGGCTGGCCACTCTCTCACTACCTATTCAATATAGT
CCTCAAAGTTCTAGTCAGAGCAATTAGACAACAAAAGGAAGTCAAAGGGA
TATGAGTTGGAAATGAAGAAGTCAAAATATCAGTATTTGCAGATGACATG
ATAGTATACCTAAGTGACCTCAAAAATTCGACCAGACGAGGATGTGGAGA
AAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCAC
TCTGTAAATCAGTCTGGAGGTTCCTCAGAAAATTGACATAGTACTACCAG
AGGATCCACCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACC
AATAATAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAAT
AGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATAT
AAAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAG
AATGAATTTATGAAATTCCTAGGCAAATGGATAGACCTGGAGGGCATCAT
CCTGAGTGAGGTACACAATCACAAAGGA

CTTTTTGCACGAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTGCTCCAAGAGAATCCATCTTTTCTGGAAG
AAGCTACAAGAGCCCCTGATACAGGAATAGGGGGGAGAGGTGGCAACAGA
AATGGTAATGTGACCCTGGTGTCTTCTATTCTTGATGCCATCCCTAGATG
GTGTAGCACATGAGAAGGGAGAGGCTGAGGCAATTTCTGTGGAAAGAACT
GACTGAACTGAAGGACGCAGTGCCACGTGGCCGAAGCCTGGGCACCAGTT
TTTCTGGTTTCTCTGGAGGCTCTTTTTTTTCATTTGTTCTCCAGGGCTTT
CTCTTAGGTAGGGTTTACTGCTTCAAACAGAAGCCATGACCAAGGCAACT
CTTATAAGTACAATTTTCTTTTTTTTTGTTTTGGTTTTTTTGTTTTTTCG
AGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTTAGA
CCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGC
TGGGACTAAAGGCGTGCGCCACCACGCCGGGCTATAAGTACAACTTTTAA
TTGAGGCTGGCTTACAGGTTCAGAGATGTAGCCTCCCCTCCCCAGCCTGA
AACCTGCTTGCTCAGGTTTCACTGTTTACATCGGGGTGGAGCTTGCTGCT
CTATCGTTCTGCTACGCCCACTGCTGGAGCC

Query= MSMg01no497_f12.g1 MSMg01no497_f12.g1 CHROMAT_FILE:
MSMg01no497_f12.g1 PHD_FILE: MSMg01no497_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:00 2005
         (629 letters)



>mm_chr18_85059854_85060882
          Length = 1029

 Score = 1000 bits (517), Expect = 0.0
 Identities = 596/643 (92%), Gaps = 38/643 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccatcttttctggaagaagctacaagagcccctgatacaggaataggggggagaggtggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccatcttttctggaagaagctacaagagcccctgatacaggaataggggggagaggtggc 260

                                                                       
Query: 61  aacagaaatggtaatgtgaccctggtgtcttctattcttgatgccatccctagatggtgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagaaatggtaatgtgaccctggtgtcttctattcttgatgccatccctagatggtgt 320

                                                                       
Query: 121 agcacatgagaagggagaggctgaggcaatttctgtggaaag--------aactgactga 172
           ||||||||||||||||||||||||||||||||||||||||||        |||||| |||
Sbjct: 321 agcacatgagaagggagaggctgaggcaatttctgtggaaagcatgatagaactgattga 380

                                                                       
Query: 173 actgaaggacgcagtgccacgtggccgaagcctgggcaccagtttttctggtttctctgg 232
           ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 381 actgaaggacgcagtgccacgtggctgaagcctgggcaccagtttctctggtttctctgg 440

                                                                       
Query: 233 aggctcttttttttca------tttgttctccagggctttctcttaggtagggtttactg 286
           || ||| |      ||      ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agactcct------cagggccatttgttctccagggctttctcttaggtagggtttactg 494

                                                                       
Query: 287 cttcaaacagaagccatgaccaaggcaactcttataagtacaattttctttttttttgtt 346
           |||||||||||||||||||||||||||||||||||||||||||    ||||||||||   
Sbjct: 495 cttcaaacagaagccatgaccaaggcaactcttataagtacaa----cttttttttt--- 547

                                                                       
Query: 347 ttggtttttttgttttttcgagacagggtttctctgtatagccctggctgtcctggaact 406
               |||||||      |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ----ttttttt------tcgagacagggtttctctgtatagccctggctgtcctggaact 597

                                                                       
Query: 407 cacttt-tagaccaggctggcctcgaactcagaaatccgcctgcctctgcctcccgagtg 465
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cactttgtagaccaggctggcctcgaactcagaaatccgcctgcctctgcctcccgagtg 657

                                                                       
Query: 466 ctgggactaaaggcgtgcgccaccacgccgggctataagtacaacttttaattgaggctg 525
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctgggactaaaggcgtgcaccaccacgccgggctataagtacaacttttaattgaggctg 717

                                                                       
Query: 526 gcttacaggttcagagatgtagcctcccctccccagcctgaaacctgcttgctcaggttt 585
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gcttacaggttcagagatgtagcctcccctccccagcctgaaacctgcttgctcaggttt 777

                                                      
Query: 586 cactgtttacatcggggtggagcttgctgctctatcgttctgc 628
           |||||||||| ||| |||||||||||| |||||||||||||||
Sbjct: 778 cactgtttacttcgcggtggagcttgccgctctatcgttctgc 820


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)