TTTTTTCTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGAT
CCGCGGAATTCTCACCTGTACCAAACAGAATGGCTGAGAAGCACCTGAAA
AAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
GAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAAATTCAGGTG
ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCAAACAATAT
TCTTAATAGCTACTTATTTCTCTTAGATATAACATGACAAATGGTCATGA
AGCTTTAGCTAAACACAGATGTGGAGAAAGGGGAACACTCCTCCATTGTT
GGTGGGATTGCAATCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTC
CTCAGAAAATTGAACATAGTACTACCGGATGATCCTGCAATACCTCTCCT
GGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGAACACATGCTCCA
CTATGTTCATAGCAGCCTTGTTTATAATAGCCAGAAGCTGGAAAGAACCC
AGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACAT
AATGGAGTACTACTCAGCTATTAAAAAAATGAATTTATGAAATTCCTAGG
CAAATGGATGGACCTGGAGGGTATCATCCTGAGTAAAGTAACCCAATCAC
AAAGGAACTCGCACAATATGTACTCACTGATAAGTGGATATTAGCCCAGA
AAACT

TCCNTTCACGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTTTTGATATGTCTTC
AATGGAGACACAGGTGAGTGGTGAAAACTAGTGGGAGCTGAGAGTAGAAA
AGAGCCTCCCTTCTCCCTGAGCTCTGAGCAGTTAAGGAGGGAGGGATGGT
TTTGACAGATCCGGTGGGAATGTGACTTAATGGTTTCCCAGCTTTCCTAG
TGTAGGTGCCAAACCTCCCCTCAGGTGATCAGGTGCATCTTCTCTGAAGC
CCTGACTCCAGAGACCCTGGAGCTAAAGTGTGCATTCTGAATGTGAGCCC
ACAACAGTACTCTTGTCCAGGGCGTGCATGAGTTGATTTCTGAGGCAGGA
CAGACAAGCTAGAGTTTGGGTCTGCAGAAAGATGGGCTCCACTAAGCAGG
AGCATGAGAAAAAACCTCCCATGTTCTCTCACATCTTTAAATGTGTCTGA
GTGGGTGGGCCCCAGCGGGAAAGTGCAGGAGCTAGCTTGGCTGCCCAGAG
CTAAATGGATTTATCTTCTAACTTCACCGTCATCGATACCATGTTGAAAG
CTTGGAATCAGCCATGGTGGGGGTATTTATGTTATGTTAAGTAGGCTAAT
GATGAANAGCAGAGTCATTTTTTTTTTCAAATTTCTTCCTCAGAACTGGT
TGTTTTTGTCAGAACATTATTGCATTCTTGAGTTAGGTACTTGT

Query= MSMg01no505_a23.g1 MSMg01no505_a23.g1 CHROMAT_FILE:
MSMg01no505_a23.g1 PHD_FILE: MSMg01no505_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:53 2005
         (576 letters)



>mm_chr18_54300303_54301284
          Length = 982

 Score = 1065 bits (551), Expect = 0.0
 Identities = 570/579 (98%), Gaps = 6/579 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttttgatatgtcttcaatggagacacaggtgagtggtgaaaactagtgggagctgaga 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttttgatgtgtcttcaatggagacacaggtgagtggtgaaaactagtgggagctgaga 260

                                                                       
Query: 61  gtagaaaagagcctcccttctccctgagctctgagcagttaaggagggagggatggtttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtagaaaagagcctcccttctccctgagctctgagcagttaaggagggagggatggtttt 320

                                                                       
Query: 121 gacagatccggtgggaatgtgacttaatggtttcccagctttcctagtgtaggtgccaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacagatccggtgggaatgtgacttaatggtttcccagctttcctagtgtaggtgccaaa 380

                                                                       
Query: 181 cctcccctcaggtgatcaggtgcatcttctctgaagccctgactccagagaccctggagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcccctcaggtgatcaggtgcatcttctctgaagccctgactccagagaccctggagc 440

                                                                       
Query: 241 taaagtg-tgcattctgaatgtgagcccacaacagtactcttgtccagggcgtgcatgag 299
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaagtggtgcattctgaatgtgagcccacaacagtactcttgtccagggcgtgcatgag 500

                                                                       
Query: 300 ttgatttctgaggcaggacagacaagctagagtttgggtctgcagaaagatgggctccac 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgatttctgaggcaggacagacaagctagagtttgggtctgcagaaagatgggctccac 560

                                                                       
Query: 360 taagcaggagcatgagaaaaaa-----cctcccatgttctctcacatctttaaatgtgtc 414
           ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||
Sbjct: 561 taagcaggagcatgagaaaaaaaaaaacctcccatgttctctcacatctttaaatgtgtc 620

                                                                       
Query: 415 tgagtgggtgggccccagcgggaaagtgcaggagctagcttggctgcccagagctaaatg 474
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagtgggtgggccccagcaggaaagtgcaggagctagcttggctgcccagagctaaatg 680

                                                                       
Query: 475 gatttatcttctaacttcaccgtcatcgataccatgttgaaagcttggaatcagccatgg 534
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatttatcttctaacttcaccatcatcgataccatgttgaaagcttggaatcagccatgg 740

                                                  
Query: 535 tgggggtatttatgttatgttaagtaggctaatgatgaa 573
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgggggtatttatgttatgttaagtaggctaatgatgaa 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 982
Length adjustment: 10
Effective length of query: 566
Effective length of database: 972
Effective search space:   550152
Effective search space used:   550152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)