Query= MSMg01no509_o15.b1 MSMg01no509_o15.b1 CHROMAT_FILE:
MSMg01no509_o15.b1 PHD_FILE: MSMg01no509_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:19 2005
(429 letters)
>mm_chr18_70143477_70144305
Length = 829
Score = 806 bits (417), Expect = 0.0
Identities = 426/429 (99%)
Strand = Plus / Minus
Query: 1 tgaagcagattagaagctagtatcacccattgggattggcaatgccttcaaaggctccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgaagcagattagaagctagtatcacccattgggattggcaatgccttcaaaggctccta 570
Query: 61 gtcaaatgatccaaacctttaacatcatttccgatggtacccaagttcacattttatttt 120
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 569 gtcaaatgatccaaacctttaacatcgtttctgatggtacccaagttcacattttatttt 510
Query: 121 tattttttatcaaattcttagaaagagtcataagaaaaaaaataagacattttattgtaa 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 509 tattttttatcaaattcttagaaagagtcataagaaaaaaaaaaagacattttattgtaa 450
Query: 181 ataacttacaagtgaaattaagaaaacataagatttagtcttacagtttctaaatatatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ataacttacaagtgaaattaagaaaacataagatttagtcttacagtttctaaatatatg 390
Query: 241 atttgttgttgagagaaaacagtgattgttaattatggcttttacttcattttagaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atttgttgttgagagaaaacagtgattgttaattatggcttttacttcattttagaaaag 330
Query: 301 cactagaaattctaaatttacttttcctctagaccacacttaatgcctgccttgaagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cactagaaattctaaatttacttttcctctagaccacacttaatgcctgccttgaagaca 270
Query: 361 ttacagaaatgaaggtgtgttcatgggtcaataacagcaaagtaattatggaccaataac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttacagaaatgaaggtgtgttcatgggtcaataacagcaaagtaattatggaccaataac 210
Query: 421 tatgttcac 429
|||||||||
Sbjct: 209 tatgttcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_o15.g1 MSMg01no509_o15.g1 CHROMAT_FILE:
MSMg01no509_o15.g1 PHD_FILE: MSMg01no509_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:20 2005
(375 letters)
>mm_chr18_70087074_70087848
Length = 775
Score = 640 bits (331), Expect = 0.0
Identities = 364/375 (97%), Gaps = 2/375 (0%)
Strand = Plus / Plus
Query: 1 aacaaaatgattactgttctctatagggggcaaatcaggtatgttattcttgcttttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaaaatgattactgttctctatagggggcaaatcaggtatgttattcttgcttttatt 260
Query: 61 caatttccttgaaaacagttttattgggggtgagagcaaattactctagaacatatccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatttccttgaaaacagttttattgggggtgagagcaaattactctagaacatatccaa 320
Query: 121 gtgtataatttagaaattctttgcaaatgtgttggacagcatggtcgtcaccacagtaca 180
||||||||||||| ||||||||||||| ||||||||||||||||| |||||| ||||||
Sbjct: 321 gtgtataatttaggaattctttgcaaacgtgttggacagcatggttgtcaccgtagtaca 380
Query: 181 gtgtccgattaggtcactgtccctaaatgactgcagtctcattgtctccctcttcaggcc 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 gtgtccgattaggtcactgtccctaaatgactgcagtctcattgtccccctcttcaggcc 440
Query: 241 caggtgactctcatccaccttctgtgtcttcaactttaccttctctggacatttcaagct 300
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 441 caggtgactctcatccaccttatgtgtcttcaactttaccttttctggacatttcaagct 500
Query: 301 agtggaatcaaacaatgtttgttccttaacatttggtttcttttacatagaatacagatt 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatggaatcaaacaatgtttgttccttaacatttggtttcttttacatagaatacagatt 560
Query: 361 ttgaggtc-cattca 374
|||||| | ||||||
Sbjct: 561 ttgagg-cacattca 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
