NGGCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCTGTTTTGCCAATACCCTATTTTTTGATTGGGTTGTTTGT
TTATTTGAAGGCTAGCTTCTTGAGTTCTTTATATATTTTGGATATTAGCC
CTATACAGGTGTAGGTTGCTGATTTGTCTTATTGAATATGTCTTTGCCTT
AGAGAAGCTTTCCAGTTTAAAAATCACTTATCAATAGTCTTCCAACAAAA
ATAACCAGTATTTTATGTGATGTATTTACTATTTGCTTTAGAAAACATAA
GCCTGTACCCTATATTTATTTATTATTATAGCATATCAATAAACACTTAT
TTAAAAAATTAAACCACAGATTATATTTAATTATTAAAAAATATTAAAAT
TATCAAATTTTCATGTAAGTGGATATAGGTAGAAAAACATGTTTCCAAGT
GAGGTAACCCAAAAAACCAAATATGTTCTCTATTTGCATAGTTCCTTTGA
AGCCCTCTATACATTTGTTACAATATATATAGTCACAGAAGTATCAAGTA
AGTGTCTAGTGTGGAGAGAGAGATATACCAAGGATGTGGAAATATTATGA
ATGGGCAGAGATGAGTGGGAGGATTAAATGGGAAGTAGGAACAAAAAGAA
GGAGTATAAGGAAGGACAACTAATAAGAATCTTTTGAAGGGGCACATGGA
AACTTACTGCTGTATAAACTTCATTAAATATGTACA

GACGATGCAGTGGGAGGCCTGGNGGCCGCCTGGTTTCCAAATTTAGGTGA
ACTATAGAATGTTCCCCAAAATTCACTCTCGCACCTGCGTACAAGGCTTG
TTTACTAGTTAGGCACAGCGGAGGCCAGCCATCTTATAATGGCGATTGCT
AGCGGCTAGCAATTGCTTGCGGCACAGCTCTCCACACATGACAACACTCT
CTTTAAATGATGGCCATGGTTGTTCAAGAGATTCAATAGCAAATAATTCA
ATGCTATTGATTTTCACCTTAATGTCCCCAAGTATTGGAAAGTAAGTTCT
GTTGGTGGCAGAACCCATTATGTCATGTGAACTGGAACTGAGATTGAAAA
GGGAGTGTTCTATGAGACTGTGTCCCCCAAAGTCTTAAAGGCAATAACCA
TTAAGTCTCAAAACATGTGCACCTAATTATGAACGGAACAAGGATAGCGC
CAATAGGCATGCTAGTACAGATGGGAGAAATTTCAAAAGACCCCATCATA
AATATAGAACTAAAAGCAACTAAAAATTATGATAGTCCATCATGTAAACA
TTCACATACCAATAGCATCATATGTATTGATAAGGTTGCATTTATATACT
TAGGAATATATATATATATATATATATACATATATATATATATATATATA
TATATATGAATGAAAGACAAAAAAAGACATAAATCTGAAAGAGAGATGGG
CACCATAAATATAAGATGCTTGAAAGAGGAAAAGGAAAAGGAGAA

Query= MSMg01no510_j14.b1 MSMg01no510_j14.b1 CHROMAT_FILE:
MSMg01no510_j14.b1 PHD_FILE: MSMg01no510_j14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:13 2005
         (685 letters)



>mm_chr18_18501069_18502153
          Length = 1085

 Score = 1189 bits (615), Expect = 0.0
 Identities = 668/687 (97%), Gaps = 7/687 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaattctctgttttgc-caataccctattttttgattgggttgtttgtttatttgaaggc 61
           ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattctctgtttagctcaataccctattttttgattgggttgtttgtttatttgaaggc 261

                                                                       
Query: 62  tagcttcttgagttctttatatattttggatattagccct--atacaggtgtaggttgct 119
           |||||||||| |||||||||||||||||||||||||||||  |||||  |||||||||||
Sbjct: 262 tagcttcttgtgttctttatatattttggatattagccctctataca--tgtaggttgct 319

                                                                       
Query: 120 gatttgtcttattgaatatgtctttgccttagagaagctttccagtttaaaaatcactta 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gatttgtcttattgaatatgtctttgccttagagaagctttccagtttaaaaatcactta 379

                                                                       
Query: 180 tcaatagtcttccaacaaaaataaccagtattttatgtgatgtatttactatttgcttta 239
           |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 380 tcaataatcttccaacaaaaataaccaatattttatgtgatgtatttactatttgcttta 439

                                                                       
Query: 240 gaaaacataagcctgtaccctatatttatttattattatagcatatcaataaacacttat 299
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 440 gaaaacataagcctgtaccctatatttatttataattatagcatatcaataaacacttat 499

                                                                       
Query: 300 ttaaaaaattaaaccacagattatatttaattatta-aaaaatattaaaattatcaaatt 358
           ||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| |
Sbjct: 500 ttaaaaaattaaaccacagattatatttaattagtagaaaaa-attaaaattatcaaaat 558

                                                                       
Query: 359 ttcatgtaagtggatataggtagaaaaacatgtttccaagtgaggtaacccaaaaaacca 418
           |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 559 ttcatgtaagtggatataggtagagaaacatgtttccaagtgaggtaacccaaaaaccca 618

                                                                       
Query: 419 aatatgttctctatttgcatagttcctttgaagccctctatacatttgttacaatatata 478
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aatatgttctctatttgcatggttcctttgaagccctctatacatttgttacaatatata 678

                                                                       
Query: 479 tagtcacagaagtatcaagtaagtgtctagtgtggagagagagatataccaaggatgtgg 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tagtcacagaagtatcaagtaagtgtctagtgtggagagagagatataccaaggatgtgg 738

                                                                       
Query: 539 aaatattatgaatgggcagagatgagtgggaggattaaatgggaagtaggaacaaaaaga 598
           ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 739 aaatattatgaatgggcagagctgagtgggaggattaaatgggaagtagaaacaaaaaga 798

                                                                       
Query: 599 aggagtataaggaaggacaactaataagaatcttttgaaggggcacatggaaacttactg 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aggagtataaggaaggacaactaataagaatcttttgaaggggcacatggaaacttactg 858

                                      
Query: 659 ctgtataaacttcattaaatatgtaca 685
           |||||||||||||||||||||||||||
Sbjct: 859 ctgtataaacttcattaaatatgtaca 885


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)