TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAGCTGGTTGCGGTGCCGTACACCTTTAATCCCAGCACTTGTGAGGCAGA
GGCAGGCAAATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTC
CAGGACAGCTAGGACTATACAGAGAAACCCTGTCTCGAAAACAAAAAACA
AACAAAAAAACAAAAAACAAAAAACAAAACCAAACAAACAAACAAGCAAA
AAACAAAAAAAAAAATAAACCAATGAACTCATGAAATTCCTACGCAAATG
TATGGATCTAGAAAATATCATCCTGAGTGAAGTAACTCAGTCACAAAAGA
ACACACATGGTATGCACTCAGTGGTAAGTGGATATTAGGCAAAGAACATG
GAATCCATCCATGCTATAACTCAAGGACCATAGGAAGCTCAATAGAAAGG
AAGACCAAAGAGTGGAAGCTTCAGTCCTACTTAGAAGGGGGAACAAAATA
ATAAGGAAAGTAGAGGGTGGGAGGCACTTGGGAGGAGGAGGAAGGAGGGG
GTAGGGGAAAATAGCGGANNGATTTTGCTTTTNTCGTGTTTCTCTCTTCG
TCTTTTTTTCCCCCTTTTTTTTTCCTCCCCTTTTCCCGCTCCTCTTTTTT
TTTTTTTTCTCCTTCCTCCTTTTNCTTTCTTTCCCCCTTCTCCCGGTTTT
TTTCCTTCTCCGTTTCTCGCGTTTTTTTCGCGTGCCCCCGTCCTTCTTTC
GCCT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTTTGAGACCAGCGTGTTCAGATCA
TATGTTCATCTCTGGCTTTACCAATTTTTAGTTTTCAGCTTCACCTTTTG
TATAAAAAGGGTCCTTTATGAATCATGCACTGGAATTGGGTGGTTTTCCT
CATTCACAGTAAGCATGAAATTTGGACAGTCTGTCCAAAGTGTGATTTGT
TACGTAGTATGTCAGATCTTTGGGTGACTGATACTATCGTAGCTGTGTGG
AGAGTCCTTATCAGGCAGGCTTTCCTCAATAGCTTCAGCTGACTACAGCT
TGAACCTTAAGATTGTGTCCATGAAACAAGACTCATGATTTCTCAGACTT
TCTATTTTCTGAACTTTTTGGAAAAAAATTTCAAGTTACTTGATTTTAAT
GTCTGCCACAAGGTGACAAAGTGTAAGTGTTTTTACTTGTTTACTCTCTC
TTAGCAGAGTTAGATCCGTGCTGTGAAGCACACAGACATTTATTAGTTTT
AAGTAGTTGGGGATTTTACTTATGAGACTCTAAAAGAGACACAGTGTTGT
ATTTTGCGACTGTTAGTCCATAGTTTTAATGTTTCTAATACTTGTATCAT
GATTATTTCTTCCTCCTCCCCCGAAGTGTCTGGAAATTTATTCCNATAAT
AAAAAATTTCAATATTTTTTAACTATTTTAAATTGGTTATTCCCCCCCCC
CGGGTTAAAAAGGTATTTAGGGG

Query= MSMg01no511_h20.g1 MSMg01no511_h20.g1 CHROMAT_FILE:
MSMg01no511_h20.g1 PHD_FILE: MSMg01no511_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:22 2005
         (431 letters)



>mm_chr18_28588955_28589786
          Length = 832

 Score =  804 bits (416), Expect = 0.0
 Identities = 428/432 (99%), Gaps = 1/432 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctttgagaccagcgtgttcagatcatatgttcatctctggctttaccaatttttagttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tctttgagaccagcgtgttcagatcatatgttcatctctggctttaccaatttttagttt 573

                                                                       
Query: 61  tcagcttcacct-tttgtataaaaagggtcctttatgaatcatgcactggaattgggtgg 119
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tcagcttcacctgtttgtataaaaagggtcctttatgaatcatgcactggaattgggtgg 513

                                                                       
Query: 120 ttttcctcattcacagtaagcatgaaatttggacagtctgtccaaagtgtgatttgttac 179
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ttttcctcatttacagtaagcatgaaatttggacagtctgtccaaagtgtgatttgttac 453

                                                                       
Query: 180 gtagtatgtcagatctttgggtgactgatactatcgtagctgtgtggagagtccttatca 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtagtatgtcagatctttgggtgactgatactatcgtagctgtgtggagagtccttatca 393

                                                                       
Query: 240 ggcaggctttcctcaatagcttcagctgactacagcttgaaccttaagattgtgtccatg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 392 ggcaggctttcctcaatagcttcagctgactacagcttgaaccttaagactgtgtccatg 333

                                                                       
Query: 300 aaacaagactcatgatttctcagactttctattttctgaactttttggaaaaaaatttca 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaacaagactcatgatttctcagactttctattttctgaactttttggaaaaaaatttca 273

                                                                       
Query: 360 agttacttgattttaatgtctgccacaaggtgacaaagtgtaagtgtttttacttgttta 419
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 272 agttacttgattttaatgtctgccataaggtgacaaagtgtaagtgtttttacttgttta 213

                       
Query: 420 ctctctcttagc 431
           ||||||||||||
Sbjct: 212 ctctctcttagc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 832
Length adjustment: 9
Effective length of query: 422
Effective length of database: 823
Effective search space:   347306
Effective search space used:   347306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)