XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CAATTGCTTTTAAGAAATAAAAATGTACCATATGTACTAGCTGTTTTTGT
GTGCCTACTTGAAACAGGCTGGAGTTATCACAGAGAAAGGAGCCTCACTT
GAGGAAATGCCTCCATGAGGTCCAGCGTAAAGCATTTTGTCAATTAGTGA
TGAAGGGTGGGAGAGCCCATTGTGGGTGGTTCGATCCCAAGGCTGGTAGT
CCTTGGTCCTGGTCCAATAAGAAAGCAAGTTGAACAAGCCAAGGGAAGCA
AGCCAGCATGTAACATCTTTCCATGGCCTCTGTATCACCTCCTGCTACCC
TACCTGCTTGAGTTCCAGTCCTGACTTTCTTTGGTGATTAACAGCAATGT
AGATATATAAGCTGAATGAATTCTTTCCTCCCTAACTTGGTTCTCAGTCA
TGATGTTTGTACAGAAACACAAACCCAGACTAAGACAACATGTGATCCAG
CAATGCCTCACTGTGAAACATGTCCAAAGGATTCAACATCCCACTCTCCA
CAAACGTTATCCTATGTCCATGGCCTCACTAGTCATAATAGCTAGAAAGC
ATACACAACATAAATGCCCTGCAGGAGACAAATGAATATTATAAATGTGG
TAAACGTTCACTATGTGAATTTAGAGCTATTTAGCTCTAACAAAAAATTA
TATCCTAAGTTTTGCAGGTAACATGGATCAAATTTAGAAAGATTACACTG
AGTGAGGG

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCCCTAACTGATGAGAAAAGTTGGGCCATCCAG
TCCACTCAAGGTCTCTATTCTTGAATGGGGAGACCCCTGCATATAGGAAA
TTGAGCTAAATAAACATTCTTTGCTTTTGCATACTATTTGAGTTTGTATT
GGCAGGATGTGGAGCCCATTGTTAGAGCTGACTCCTGGGATTTACCCTGC
CCATCCCTTCTAGAGACCTAGCTCTGCAGCAGCCATATTCCCGTGGCTTT
CATTATTGTTTTCTGAACTTAGTTCTTTTCTGCATGACAAACACCAATAA
TGTTTACTAAAGAAGGTAACTGACACAGAGCCTCACATCTGGAGAATCAG
CAGAGAAAAAGAGACTGTGAAACAATCAGACTTAAATGGGATGTCTTTAG
GAAACACCTCCTCTAGGAGCTCAGGGAGAAAAGGAGGTAGAGATTGGTAG
AGTCAGGGGTTGCTTGACACCAAGGACAGTGTCTTCAAAACAGAACTGTC
CTAACACATGAAATCAAAGAGAATGTGTCAGTATGCACAAGTCCTGTACA
GGTTCAAGCCAGAGGTGGCCCTAGTTCTGAGAGGGGAAGTGAACACAAAT
TCTCATACCTAAGCAAACAGTTATATGTAACTGAGACCCATTTTCAAAGA
AAAAATAGTTTTCTTCAAGAGTCTCCCTGGTTATATTACTAACTTAAGAG
TAGGACG

Query= MSMg01no512_f09.g1 MSMg01no512_f09.g1 CHROMAT_FILE:
MSMg01no512_f09.g1 PHD_FILE: MSMg01no512_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:27 2005
         (545 letters)



>mm_chr18_87170096_87171040
          Length = 945

 Score = 1054 bits (545), Expect = 0.0
 Identities = 545/545 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccctaactgatgagaaaagttgggccatccagtccactcaaggtctctattcttgaatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctaactgatgagaaaagttgggccatccagtccactcaaggtctctattcttgaatgg 260

                                                                       
Query: 61  ggagacccctgcatataggaaattgagctaaataaacattctttgcttttgcatactatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagacccctgcatataggaaattgagctaaataaacattctttgcttttgcatactatt 320

                                                                       
Query: 121 tgagtttgtattggcaggatgtggagcccattgttagagctgactcctgggatttaccct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagtttgtattggcaggatgtggagcccattgttagagctgactcctgggatttaccct 380

                                                                       
Query: 181 gcccatcccttctagagacctagctctgcagcagccatattcccgtggctttcattattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcccatcccttctagagacctagctctgcagcagccatattcccgtggctttcattattg 440

                                                                       
Query: 241 ttttctgaacttagttcttttctgcatgacaaacaccaataatgtttactaaagaaggta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttctgaacttagttcttttctgcatgacaaacaccaataatgtttactaaagaaggta 500

                                                                       
Query: 301 actgacacagagcctcacatctggagaatcagcagagaaaaagagactgtgaaacaatca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgacacagagcctcacatctggagaatcagcagagaaaaagagactgtgaaacaatca 560

                                                                       
Query: 361 gacttaaatgggatgtctttaggaaacacctcctctaggagctcagggagaaaaggaggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacttaaatgggatgtctttaggaaacacctcctctaggagctcagggagaaaaggaggt 620

                                                                       
Query: 421 agagattggtagagtcaggggttgcttgacaccaaggacagtgtcttcaaaacagaactg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agagattggtagagtcaggggttgcttgacaccaaggacagtgtcttcaaaacagaactg 680

                                                                       
Query: 481 tcctaacacatgaaatcaaagagaatgtgtcagtatgcacaagtcctgtacaggttcaag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcctaacacatgaaatcaaagagaatgtgtcagtatgcacaagtcctgtacaggttcaag 740

                
Query: 541 ccaga 545
           |||||
Sbjct: 741 ccaga 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)