XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
TTTAGTTCCCCCTACTTTAAAATTTTATAAAGCTTTATTTTTATTCATAT
CTATATGAATGTATTTAAATCCACTCTCTTTCTGTCTCTGGTAGGAAAAC
AAATAAGCTTCTAAGAGATAATACAACAAAATAAAAATAAAAAGCAAAAT
TTAATGCAAAACAAAAAAGAAGAAAGAGAGCCCAAGAGTAGACACAAGAA
ACAGGCCTAGTCATTCACAATTCAGAAATCCCATAAAAAGACTACCTTGG
AATCTATAATATACACACAGAGGACCTTGTATAGACCCTTGCAGGCTCCG
TGCATGCTGCTTCAGCCTCTGTGAGTTCATATGAGCTTTGCTTATGTTAG
TTTAGGGGACTTTGTTTCTTGGTGTTCTTGATATGCTCCAGCTCTTACAT
TCTTTCTGTCTCCCTCTCCTCAGTGTTTCTTAAATGCTGAGGGGAGGGAA
TTGATGGAGACATCTCATTTTGAGCTCCATGTTCCAATCAAACTTTATAT
AATGTCTGTCCATTGGTCTTTACGTTTGTCCCCTTCTGCTGGAGGAGGAA
GCTTATTTGATGTTGGCTGAGCCAGCACTGATCTATGAGTATAGCAAATG
TCATTTGGAATCATTTTATTGCTATTTTATTGTTTGCTTGTTTTAGAACA
ATAATACTTGGTAAATTCTTTACCTATTAACTTAAGCTTTAAC

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTTAAAGAAAGAACATTAAGGCAGGAATG
ATGGCTTAGCTGGTTAGAGCTCAAAACTCACATGTAAAAAATTCAGTTTC
ATTTCTGGCCATTGAACTAAGTCAGTTCAAAACAATCTTTAACTTTAGCT
CAGGGAACCTAGCATCCATCCTTTTCTGCCATCTGCAGGCATCTGCACTC
ATGTGCAGGTATTTACACACACACACACACACACACACACACACACACAC
ACACACGAGTTTCACACAATACTAAAATAAAATAAAAATATTGTTCACTC
TAGTCCTATTTACAATCAAGAAATTAATATAAATAGCCTTCAACACATGA
ATGAATACTGAAAATGTAATATGTATACATGACAGAATATTACTAATCTG
TGAAGAAAGATGAAATAATAAAATTTGCAAGTAAAATGATGAAAACTAAA
AGCATTATATGAAATGAAGTAAGCACAACCTCTGAAATGAATTCACACAT
TTCTCGGTTGAGTTTGCATGTTCCTTCTTCACTGAGGCTCCTAGATACAA
ATCTTTGACTATGAGTACAGACTATACAGTGATTATAATTCTTTAAAGAT
GTGAAACAGGTAAAATGCTACATGAATAAAAAAAGTTTATTATAAATTTT
TCTTTTAAAAATTATAAATGACCTGTAAAACGTTATATGCAAGCACATTA
AT

Query= MSMg01no514_k13.g1 MSMg01no514_k13.g1 CHROMAT_FILE:
MSMg01no514_k13.g1 PHD_FILE: MSMg01no514_k13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:38 2005
         (640 letters)



>mm_chr18_86264312_86265351
          Length = 1040

 Score =  650 bits (336), Expect = 0.0
 Identities = 373/394 (94%), Gaps = 15/394 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttttaaagaaagaacattaaggcaggaatgatggcttagctggttagagctcaaaactca 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 394 ttttaaagaaagaacattaaggcaggaatgatggcttagctggttagagctcaaaaatca 335

                                                                       
Query: 61  catgtaaaaaattcagtttcatttctggccattgaactaagtcagttcaaaacaatcttt 120
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 catgtaaaaaaaccagtttcatttctggccattgaactaagtcagttcaaaacaatcttt 275

                                                                       
Query: 121 aactttagctcagggaacctagcatccatccttttctgccatctgcaggcatctgcactc 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aactttagctcaggggacctagcatccatccttttctgccatctgcaggcatctgcactc 215

                                                                       
Query: 181 atgtgcaggtattt------acacacacacacacacacacacacacacacacacacacac 234
           ||||||||||||||      ||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 atgtgcaggtatttacacacacacacacacacacacacacacacacacacacacacacac 155

                                                                       
Query: 235 acg---------agtttcacacaatactaaaataaaataaaaatattgttcactctagtc 285
           |||         ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 acgcacacacacagtttcacacaatactaaaataaaataaaaatattgttcactctagtc 95

                                                                       
Query: 286 ctatttacaatcaagaaattaatataaatagccttcaacacatgaatgaatactgaaaat 345
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 94  ctatttacaatcaagaaattaatataaatatccttcaacacatgaatgaatactgaaaat 35

                                             
Query: 346 gtaatatgtatacatgacagaatattactaatct 379
           ||| ||||||||||||||||||||||||||||||
Sbjct: 34  gtagtatgtatacatgacagaatattactaatct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)