Query= MSMg01no515_e13.b1 MSMg01no515_e13.b1 CHROMAT_FILE:
MSMg01no515_e13.b1 PHD_FILE: MSMg01no515_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:32 2005
(700 letters)
>mm_chr18_20124288_20125387
Length = 1100
Score = 1011 bits (523), Expect = 0.0
Identities = 559/571 (97%)
Strand = Plus / Minus
Query: 130 gctagagggtcttctggacgactgcatgtagcagttattactgtggggttagtgatcaca 189
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1100 gctagagggtcttctggacgactgcatgtagcagttattactgtggcgttagtgatcaca 1041
Query: 190 ttttcttaaatctcctattattataatgtaggatggaagtctagataagatataaaatgt 249
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 1040 ttttcttaaatctcctattattacgatgtagcatggaagtctagataagatataaaatgt 981
Query: 250 gcttaattttgtttgttgaaaacaatctgatctaaggaaaaaaaaggggcttttaaattt 309
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 980 gcttaattttgtttgttgaaaacaatctgatctaaggaaaaaaagggggcttttaaattt 921
Query: 310 ttatttattttttaaattttccagttggcaaattggatgagtaaatatcgttaatgtttg 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 ttatttattttttaaattttccagttggcaaattggatgagtaaatatcgttaatgtttg 861
Query: 370 acttaaataaatactagctacttttaagatctacaattgaactcatgattctaaacactt 429
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 acttaaataaatacgagctacttttaagatctacaattgaactcatgattctaaacactt 801
Query: 430 tcacacaaagaagaggattccttctgttagaaatatcaccaaaatgcacttgtgattact 489
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 800 tcacacaaagaagaggattccttctgttagaaatatcaccacaatgcacttgtgattact 741
Query: 490 gcacatttcaaattgtgtctgtaaattttgaaaacaaggataattcaaaggataccacag 549
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 740 gcacatttcaaattgtgtctgtaaattttgaaaacaaggatatttcaaaggatgccacag 681
Query: 550 ttaatgttcttattgtcctcctttggcccaaagaacaaataataaaggatggttgcttta 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttaatgttcttattgtcctcctttggcccaaagaacaaataataaaggatggttgcttta 621
Query: 610 ttctatgtttggaaaattaagtatggccttttaaaactgtatttcttaatatttttttta 669
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 620 ttctatgtttgaaaaattaagtatggccttttaaaactgtatttcttaatattattttta 561
Query: 670 cttagcggtactgctaactttagtatgtgga 700
||||||||||||||||||||| |||||||||
Sbjct: 560 cttagcggtactgctaactttggtatgtgga 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space: 752100
Effective search space used: 752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_e13.g1 MSMg01no515_e13.g1 CHROMAT_FILE:
MSMg01no515_e13.g1 PHD_FILE: MSMg01no515_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:32 2005
(693 letters)
>mm_chr18_19928642_19929735
Length = 1094
Score = 1319 bits (682), Expect = 0.0
Identities = 691/694 (99%), Gaps = 2/694 (0%)
Strand = Plus / Plus
Query: 1 catccatgtgccaccaaattttatgaaattttttaaacagaaataccccattgaggaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 catccatgtgccaccaaattttatgaaattttttaaacagaaataccccattgaggaaat 261
Query: 61 agactacatattctttatccattcttctgttgatggacatctaggttgttttcaatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agactacatattctttatccattcttctgttgatggacatctaggttgttttcaatttct 321
Query: 121 ggatatcatgaatttagcagtaattaacatgtttgtgagcaagtgttcttatgggaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggatatcatgaatttagcagtaattaacatgtttgtgagcaagtgttcttatgggaggat 381
Query: 181 gatgtattctttgtgtataagcccaacagtggaatcactggatcttgaggtagacagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gatgtattctttgtgtataagcccaacagtggaatcactggatcttgaggtagacagatt 441
Query: 241 ttcttcttcttgaggaaccaccacaatgatttccatagcagtcctacaagtttgtactct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttcttcttcttgaggaaccaccacaatgatttccatagcagtcctacaagtttgtactct 501
Query: 301 accagcaatggataagtattcctcttattccttattccacatccttgccagcatgagctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 accagcaatggataagtattcctcttattccttattccacatccttgccagcatgagctt 561
Query: 361 tacttggactattgatcttagccattctgacagatagaaaatggaatctcaacttagtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tacttggactattgatcttagccattctgacagatagaaaatggaatctcaacttagtac 621
Query: 421 tcatctacattttcctgatgactaaagatgttgattttttttcctagtgtttctcagcca 480
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 622 tcatctacatttccctgatgactaaagatgttgattttttt-cctagtgtttctcagcca 680
Query: 481 tttgggtttcctctattgagagttctatttaaattctatcccattttaaagttggatatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttgggtttcctctattgagagttctatttaaattctatcccattttaaagttggatatt 740
Query: 541 ttgaaatctagcttcttgaggtttttttcaaaacagtggatttcc-actaaattttcaac 599
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 741 ttgaaatctagcttcttgaggtttttttcaaaacagtggatttcccactaaattttcaac 800
Query: 600 actaatctttaccaatactccttgacagtttttaacataatagtcaacgtaactgatgaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 actaatctttaccaatactccttgacagtttttaacataatagtcaacgtaactgatgaa 860
Query: 660 aaatatctcatgaagtttttatttgcattttcat 693
||||||||||||||||||||||||||||||||||
Sbjct: 861 aaatatctcatgaagtttttatttgcattttcat 894
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1094
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1084
Effective search space: 740372
Effective search space used: 740372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
