XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCCG
TGCTTTGCTGAATGGGAGATGTGGGAGTGGCCATCCTTGTTTCATCCTGA
CCTCTGAGTAAAAGCGCCCAGCTCCCCACCATTGAGGATGTATAGCTATC
GCAAAATCATATATGGATTTTCCTGTATTAAAGTGCATTACTGGTAAATA
TAATTTATAGCATTTTATTATGAAATTACATTGAATTTTGTCATGAATTA
CTGGCACCAACTGAGATAAACTTATGAGTTTTATCTTTTGTATGGTTAAT
ATAATATATTACCTTTATTAATTTATATATGTTGAACCATTTATCCTAGA
AATCAATCCTTTATGCTGGTTATATATGGTCATTTTAGCATGTTGTAGAA
TTTCATTTGTTACTATTTTGTCAATGGTATCTGTAGCAAAATTCAACAGA
AATATTGACATGTCTTTGCTATGCTGGTAGTCTCCTTAACTGGATTGAGT
ATAAGGCTAATTCTAATCTTATATAATGAATTTGAAAGTGTTTAGGTTTT
TGGAAAAAAAAATGAAGGCCTTAAATGCTTGAAAGAGCATTTCATGGGGA
ACCATGACCCTGGTTCTACTGAGAACTTATATTGTCTCCTCACTCATTAG
TCATTAGTTCAGGTATTCTTACTTTTTTCACATAAATCTCANGAGTTGTG
TACTTCTAGGTATCCATTATTGTATCTAGGCTGCCCAGNTTCTTATCAAG
AAGGTGTCTATATAA

GGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCCAGCAGCTCTTCTCACCTGTTAGCACATGGAG
GTTTTGTATAAAGAGCCGCAGAACAACTGTCCCGGCTAATGTTGTCAGCG
TACAGGACCCAGAGCCGTGTGAGAGAGCAGCTTTTGGTATGTCTGTGAGT
GAGAGCGTAGCCAGAGGAGGCTAGGTTTGGTGGGACTCAGGGCAGCACTA
ACTCTGGATGGCACCGGGCCGAGTGCTGGGATCCTGGCCTGCACAGACAG
GGTTATCCATGCTATGTGCTGGTTCCCTTCCTCCTGCCGCTCCTCCCTTG
CCTCCTGACAGAGCATGTGGTGTGACTGCTGCCCAAGCTCCTGACACCAA
GACTTCCTGTGCTGTACATTTGAACTGTAAGCCAAAATTCCCTTACTCCC
CTAGGTTGCCTAGTCTGGTATTTTGACATAGCAACTGGAAAAGTGACTAG
TGCACACTGATTCTGAATATCAGCCTTTCAGTCTGCCATGTCAGACTTAG
AGAACCACAGCATGCTGCAGTTTCTGGTGACAGACTGAGCCAGCATGGGT
TCTGACAGGGCTCTGAAGTGATTGGTTGCCCACTGTTACCTCTCAGGCCC
CCTCGTACATGAACTTGGAGGAGTGAGGGACCTAGGTCCCTGGTGTGTCT
GAGTGTAGTCTCTCCCTGCGCATGTCCTGTGTTAGCCTGTCTCAGGACAC
CGACCTCTCCTTTATTGTGCC

Query= MSMg01no519_j23.g1 MSMg01no519_j23.g1 CHROMAT_FILE:
MSMg01no519_j23.g1 PHD_FILE: MSMg01no519_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:23 2005
         (605 letters)



>mm_chr18_83166360_83167364
          Length = 1005

 Score =  986 bits (510), Expect = 0.0
 Identities = 597/668 (89%), Gaps = 66/668 (9%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccagcagctcttctcacctgttagcacatggaggttttgtataaagagccgcagaacaac 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ccagcagctcttctcgcctgttagcacatggaggttttgtataaagagccgcagaacaac 200

                                                                       
Query: 61  tgtcccggctaatgttgtcagcgtacaggacccagagccgtgtgagagagcagcttttgg 120
           |||| ||||||  || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtctcggcta--gt-gtcagcgtacaggacccagagccgtgtgagagagcagcttttgg 257

                                                                       
Query: 121 tatgtctgtgagtgagagcgtagccagaggaggctagg---------------------- 158
           ||||||||||||||||||||||||||||||||||||||                      
Sbjct: 258 tatgtctgtgagtgagagcgtagccagaggaggctaggagccgtgtgagagagcagcttt 317

                                                                       
Query: 159 -----------------------------------------tttggtgggactcagggca 177
                                                    |||||||||||||||||||
Sbjct: 318 tggtatgtctgtgagtgagagcgtagccagaggaggctaggtttggtgggactcagggca 377

                                                                       
Query: 178 gcactaactctggatggcaccgggccgagtgctgggatcctggcctgcacagacagggtt 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcactaactctggatggcaccgggccgagtgctgggatcctggcctgcacagacagggtt 437

                                                                       
Query: 238 atccatgctatgtgctggttcccttcctcctgccgctcctcccttgcctcctgacagagc 297
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 438 atccatgctatgtgctggttcccttcctcccgccgctcctcccttgcctcctgacagagc 497

                                                                       
Query: 298 atgtggtgtgactgctgcccaagctcctgacaccaagacttcctgtgctgtacatttgaa 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atgtggtgtgactgctgcccaagctcctgacaccaagacttcctgtgctgtacatttgaa 557

                                                                       
Query: 358 ctgtaagccaaaattcccttactcccctaggttgcctagtctggtattttgacatagcaa 417
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 558 ctgtaagccaaaattcccttactcccctaggttgccgagtctggtattttgacatagcaa 617

                                                                       
Query: 418 ctggaaaagtgactagtgcacactgattctgaatatcagcctttcagtctgccatgtcag 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ctggaaaagtgactagtgcacactgattctgaatatcagcctttcagtctgccatgtcag 677

                                                                       
Query: 478 acttagagaaccacagcatgctgcagtttctggtgacagactgagccagcatgggttctg 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 678 acttagagaaccacagcatgctgcagtttctggtgacagactgagccagcatgggctctg 737

                                                                       
Query: 538 acagggctctgaagtgattggttgcccactgttacctctcaggccccctcgtacatgaac 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 acagggctctgaagtgattggttgcccactgttacctctcaggccccctcgtacatgaac 797

                   
Query: 598 ttggagga 605
           ||||||||
Sbjct: 798 ttggagga 805


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)