NNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGAAAATAAAGGCAGGGGGGATAAGATGAATAAGATCATTGT
CTTAGTTGGGGTTTTATTACTGTAGAGACATCGTGACCATAACAACTCTT
ATAAAGTATTTAATTGGGGCTGGCTTATAGTTTCAGAGGTTTAGTCCATT
ATCATTATGGTGAGACAAGATGGTGTGCAAGCAGACTTAGTGCTGGAGAA
GCTGAGATCCTCAGTCAACAAAAGGAGATTGTGTGCCACACTGGGCTTAG
CTTGAGGACAGGAGCCCTCAAAGCCTGCCCCCAAAGAAACACATTTCTTC
CAATGAGGCCGAACCTACTCCAACAAGGCCACATCTCCTAATAGTGTCAC
TCCCTATGGGTTAAGCATTCAAACACATGAGACTATGAGGCCATCCCTAT
TCAAACTGCCATATTCTACTCCCTGGCTCCTATAAGCTTGTAGCCATAAC
ATGATGCAAAATGCAAAGTCCCATGTTCTATCACAGTCTCAACAATGTAT
AAAAGTTCAAAGTATCCTCTGAGAGTCATGCATCTTAACTGGAATCCCCT
ACAAAAGTAAAATTAAAAAACAGATCTAATGCGCAGGACATACCATTAAC
ATTGCAAAACACAGGGAAGAGAGCACAGTGAAGAAAGACTGGACCAAAGC
AAGACCAAAAACCAGCTGGACGAACTCCAAACTCCATATCTCCATGTCTG
ATGTCAAAGGAA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTAACCAGAACACCAATGGCTTGTGCT
GTAAGATCTAGAATTGACAAATGGGACCTCATAAAATTGCAAAGCTTCTG
TAAGGCAAAGGACACTGTCATTAAGACAAAAAGGCAACCAACAGATTGGG
GAAAGAGCTTTACCAATCCTAAATCTGATAGAGGGCTAATATTCAATAAA
TACAAAGAACTCAAGAAGTTAGACTGCAGATAACCCAATAACCCTATTAA
AAATGGAGTACAGAGCTAAACAAAGAATTCTCAACTGAGGAATACCGAAT
GGCTGAGAAACACCTAAAGAAATGTTCAACATCCTTAATCATCAGGGAAA
TGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCT
AAGATAAAAAACTCAGGTGACAACAGATGCTGGCGAGGATGTGGAGAAAG
AGGAACACTCCTCCATTGCTGGTGGGATTGCAAGCTGGTACAACCACTCT
GGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCGGAA
GATCCAGCAATACCTCTCCTGGGCATATTTCCACATGCTTTTGTATTTGT
TCCCGTGGCCAGAACATTCTGTCAAATGCCCGAGGCTAGAGATCATGGGA
CTGAATGCCCTGAAACCGTGACCCCAAACAAATCATTTCTCACTCAGATT
GTTTATGCTAGGCATTCCTTCC

Query= MSMg01no520_l05.g1 MSMg01no520_l05.g1 CHROMAT_FILE:
MSMg01no520_l05.g1 PHD_FILE: MSMg01no520_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:49 2005
         (673 letters)



>mm_chr18_46857210_46858282
          Length = 1073

 Score = 1193 bits (617), Expect = 0.0
 Identities = 659/673 (97%), Gaps = 1/673 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaaccagaacaccaatggcttgtgctgtaagatctagaattgacaaatgggacctcata 60
           |||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||
Sbjct: 202 ctaaccagaacaccaatggcttgcaccataagatctagaattgacaaatgggacctcata 261

                                                                       
Query: 61  aaattgcaaagcttctgtaaggcaaaggacactgtcattaagacaaaaaggcaaccaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaattgcaaagcttctgtaaggcaaaggacactgtcattaagacaaaaaggcaaccaaca 321

                                                                       
Query: 121 gattggggaaagagctttaccaatcctaaatctgatagagggctaatattcaataaatac 180
           ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 322 gattggggaaagatctttaccaatcctaaatctgataga-ggctaatatccaatatatac 380

                                                                       
Query: 181 aaagaactcaagaagttagactgcagataacccaataaccctattaaaaatggagtacag 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 aaagaactcaagaagttagactgcagagaacccaataaccctattaaaaatggagtacag 440

                                                                       
Query: 241 agctaaacaaagaattctcaactgaggaataccgaatggctgagaaacacctaaagaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctaaacaaagaattctcaactgaggaataccgaatggctgagaaacacctaaagaaat 500

                                                                       
Query: 301 gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacctca 360
           ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 gttcaacattcttaatcatcagggaaatgcaaatcaaaacaacactgagattccacctca 560

                                                                       
Query: 361 caccagtcagaatggctaagataaaaaactcaggtgacaacagatgctggcgaggatgtg 420
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 caccagtcagaatggctaagataaaaaactcaggtgacagcagatgctggcgaggatgtg 620

                                                                       
Query: 421 gagaaagaggaacactcctccattgctggtgggattgcaagctggtacaaccactctgga 480
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 gagaaagaggaacactcctccattgctggtgggattgcaagctggtgcaaccactctgga 680

                                                                       
Query: 481 aatcagtctggcagttcctcagaaaattggacatagtactaccggaagatccagcaatac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 aatcagtctggcagttcctcagaaaattggacatagtactaccggaagacccagcaatac 740

                                                                       
Query: 541 ctctcctgggcatatttccacatgcttttgtatttgttcccgtggccagaacattctgtc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctctcctgggcatatttccacatgcttttgtatttgttcccgtggccagaacattctgtc 800

                                                                       
Query: 601 aaatgcccgaggctagagatcatgggactgaatgccctgaaaccgtgaccccaaacaaat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaatgcccgaggctagagatcatgggactgaatgccctgaaaccgtgaccccaaacaaat 860

                        
Query: 661 catttctcactca 673
           |||||||||||||
Sbjct: 861 catttctcactca 873


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space:   704769
Effective search space used:   704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)