CCTCTTCTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCTGACATATAAGTACTGAAATCACTGCCCTCCCTCCTA
AAGCTGTGCAGCTTCCCAGATTGATTCTGCCCCTTCAGCTGCAGCTGCCT
GTTCAAAATCAAAAGAGCCATAACATACCCCTTGGTCGCAGCATCACCCG
CAGTCTCCTCCAGTGCTGGTGAATTCAGTCAACTTGTCTTTAGAGCACAG
GCACAGAGCAAATAAGCCAGGCTGTACTTTGAGGCAAGTTTGGTATTTTT
TAAATGCTTAAGTACACAAACAATACAATCACAGAAATATGTGCTTTGGC
TATAAATAAGTCTCTACTACTATGTAAGTAACCTGTGTTAGAAATTCAAA
GCTTTGCATTTTAATGTTACTCATTTTTTTCCTGGTGTGTTTGGGTGTAT
TCATATACACATATGTAAATAAAAACATAGATGTATCGGTATCTTTATTT
ATTTATTTGTTTGCCTTGGGTATTTTTTTGTTTTTTTGTTTTTTTTTTGT
TTTTTGTTTTTTTTGTTTTTTGTTTTTGGAGACAGGGTTTCTCTGTAGCC
TTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGA
AATCCACCTGCCTCTGCCTCCCAAGTGCAGGATTAAAGGCGTGTGCCACA
CTTTGTGTAATTTTGAGACACGCAGTATCATGAAATGCAGGCTAGCC

NTTTCACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATACAAATTTTCCTGAT
GAACATTGATGTAAAAATACTCAATAAAATTTTTGCACACAGAATCCAAG
AACTCATCAAAAACATCATCCACCATGATGAAATAGGTTTTATCACATAC
ATGAAATATAAGTTTTATCAATATATGAAAATCCATAAATGTAATCCACC
ATATAAATAAACTGAAAAAAAACAAAAACAAAAACAAAAACAAAAAACCA
CACACACACACACAAGATCATCTCAGATGTTGTGGATAGCCCTGGAGCTA
ATTATATTTGATGTTAATTCTGTTTTCCTGTGAGTGGTTGTGAACAAGGA
ATGAGTCAGCACTCAGGTGATTTCCTGTAAAACTGCTTTCCACCTTAATT
TGTAAAATAAAGGATAGCTGATGACTGGGTAGATAAAAGGGAAGGTGGAG
GGGAAGAGGGAGAGAAAAGAAGGATAAAATGGGAGAGAGGATGAAGAGGA
GGAGGAGGAATAAAAACTTAGCCGACTCTCTTGGCCTGGTGATATCGTTT
GTTCCAATGGTTCTCATATATGCGTCAATACGGTACCTTTCTTTCAAAAT
TTGCTTTATTCAGGTTCTACAGCCTGTTACTTTCATCCAATTCGCGTCGT
GCCTTTTCTTTCTCCGGGCCTTTTCTCGGCGTTTGCATAGTTCACTTGCC
TTTCCAATGAATT

Query= MSMg01no521_h05.b1 MSMg01no521_h05.b1 CHROMAT_FILE:
MSMg01no521_h05.b1 PHD_FILE: MSMg01no521_h05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:47 2005
         (627 letters)



>mm_chr18_85803031_85804059
          Length = 1029

 Score = 1002 bits (518), Expect = 0.0
 Identities = 594/628 (94%), Gaps = 22/628 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgacata-taagtactgaaatcactgccctccctcctaaagctgtgcagctt 63
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgacaaagtaagtactgaaatcactgccctccctcctaaagctgtgcagctt 264

                                                                       
Query: 64  cccagattgattctgccccttcagctgcagctgcctgttcaaaatcaaaagagccataac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 265 cccagattgattctgccccttcagctgcagctgcctgttcaaaatcaaaagagccataaa 324

                                                                       
Query: 124 ataccccttggtcgcagcatcacccgcagtctcctccagtgctggtgaattcagtcaact 183
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 ataccccttggtcgcagcatcacccgcagtctccttcagtgctggtgaattcagtcaact 384

                                                                       
Query: 184 tgtctttagagcacaggcacagagcaaataagccaggctgtactttgaggcaagtttggt 243
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtctttagagcaggggcacagagcaaataagccaggctgtactttgaggcaagtttggt 444

                                                                       
Query: 244 attttttaaatgctta-agtacacaaacaatacaatcacagaaatatgtgctttggctat 302
           |||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 attttttaaatgcttata-tacacaaacaatacaatcacagaaatatgtgcgttggctat 503

                                                                       
Query: 303 aaataagtctctactactatgtaagtaacctgtgttagaaattcaaagctttgcatttta 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaataagtctctactactatgtaagtaacctgtgttagaaattcaaagctttgcatttta 563

                                                                       
Query: 363 atgttactcatttttttcctggtgtgtttgggtgtattcatatacacatatgtaaataaa 422
           |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 atgttactcaattttttcctggtgtgcttgggtgtattcatatacacatatgtaaataaa 623

                                                                       
Query: 423 aacatagatgtatcggtatctttatttatttatttgtttgccttgggtatttttttgttt 482
           ||||||| |||||||||||||||||||||||    |||||| ||||||||||||||||||
Sbjct: 624 aacataggtgtatcggtatctttatttattt----gtttgctttgggtatttttttgttt 679

                                                                       
Query: 483 tttt---gttttttttttgttttttgttttttttgttttttgtttttggagacagggttt 539
           ||||   ||||       |||||| ||||||   | |||| |||||||||||||||||||
Sbjct: 680 ttttctggttt-------gttttt-gttttt---gatttt-gtttttggagacagggttt 727

                                                                       
Query: 540 ctctgtagccttggctgtcctggaactcactttgtagaccaggctggcctcgaactcaga 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 728 ctctgtagccttggctgtcctggaactcactttgtagaccaggctggcctcaaactcaga 787

                                       
Query: 600 aatccacctgcctctgcctcccaagtgc 627
           ||||||||||||||||||||||||||||
Sbjct: 788 aatccacctgcctctgcctcccaagtgc 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1029
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1019
Effective search space:   628723
Effective search space used:   628723
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)