Query= MSMg01no524_e15.b1 MSMg01no524_e15.b1 CHROMAT_FILE:
MSMg01no524_e15.b1 PHD_FILE: MSMg01no524_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:31 2005
(691 letters)
>mm_chr18_49459052_49460142
Length = 1091
Score = 1290 bits (667), Expect = 0.0
Identities = 687/697 (98%), Gaps = 6/697 (0%)
Strand = Plus / Plus
Query: 1 taaaaagtgttcatgaaaagaaaaagaaagctgaggaagctgaagcttgagct------g 54
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 195 taaaaagtgttcatgaaaagaaaaagaaagctgaggaagctgaagcttgagctctggtgg 254
Query: 55 ctagagcagactctaatgttcagctcttgggaaggctgctctagtaataccttggttaag 114
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtagagcagactctaatgttcagctcttgggaaggctgctctagtaataccttggttaag 314
Query: 115 cctggcagatcactgacaatagagcgagagggaatgagcacttgatgtggaatggatgac 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cctggcagatcactgacaatagagcgagagggaatgagcacttgatgtggaatggatgac 374
Query: 175 atcgaggcagcaggttgcataatggaacaacaacaaatgtaacagatcatggatccaact 234
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 attgaggcagcaggttgcataatggaacaacaacaaatgtaacagatcatggatccaact 434
Query: 235 gggacttctcttaccaatatttggaactggtaaaaacaaggatgagagggctaacggaac 294
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 435 gggacttctcttaccaatatttggaattggtaaaaacaaggatgagagggctaacggaac 494
Query: 295 aagggttcccaagattctaaatggcatgtcttagatggatggtgatgtctcgaaggtact 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aagggttcccaagattctaaatggcatgtcttagatggatggtgatgtctcgaaggtact 554
Query: 355 gaaagcccatgaagaacgacaggcttgaagtaagtgcctgcatgttaattttaccttttt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gaaagcccatgaagaacgacaggcttgaagtaagtgcctgcatgttaattttaccttttt 614
Query: 415 ggtcttgaattcaatcaatagcagttaagataaaagagaaggaaggcactgtagagcccc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ggtcttgaattcaatcaatagcagttaagataaaagagaaggaaggcactgtagagcccc 674
Query: 475 tgaatgatcttgtcagtagatagacatttccaaatcactcatttaagagaagtgattaat 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgaatgatcttgtcagtagatagacatttccaaatcactcatttaagagaagtgattaat 734
Query: 535 gacttagtataaacactatttcctaagcagagactgtagagtaagaagaggagcatatgt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gacttagtataaacactatttcctaagcagagactgtagagtaagaagaggagcatatgt 794
Query: 595 gaaccaagctcagaaaagccttctgacccaaagaaaaagagttgatgagcctacagagga 654
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 795 gaaccaagctcagaaaagccttctgacccaaagaaaaggagttgatgagcctacagagga 854
Query: 655 gaagcagcacatggagagaaacatggaaacacacagg 691
|||||||||||||||||||||||||||||||||||||
Sbjct: 855 gaagcagcacatggagagaaacatggaaacacacagg 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_e15.g1 MSMg01no524_e15.g1 CHROMAT_FILE:
MSMg01no524_e15.g1 PHD_FILE: MSMg01no524_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:31 2005
(655 letters)
>mm_chr18_49642289_49643343
Length = 1055
Score = 957 bits (495), Expect = 0.0
Identities = 587/655 (89%), Gaps = 58/655 (8%)
Strand = Plus / Minus
Query: 1 aatgttgctgctcgaaataaagttctgtgtttaggaatcttgggtcacgtaaaacacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 aatgttgctgctcgaaataaagttctgtgtttaggaatcttgggtcacgtaaaacacact 637
Query: 61 aagcagggctgtgcagagtttttcctatgtcggtatatatcctgaaccttctgaacaaat 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 636 aagcagggctgtgcagagtttttcctatgtctgtatatatcctgaaccttctgaacaaat 577
Query: 121 agcaccgtgatgttctcttccatttcatcgatgagagagagagagagagagagagagaga 180
|| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agtaccgtgatgttctcttccatttcatcgatgagagagagagaga-------------- 531
Query: 181 gagagagagagagagagagagagagagagagagagagagagagaatcgcctgactgactc 240
|| ||||||||||||||
Sbjct: 530 -----------------------------------------ag---cgcctgactgactc 515
Query: 241 acgccacacagaatacacgtaaaaggcattccaagcttgtagataaaacttagacacatt 300
|||||||||||||||||| | ||||||| |||||||||| |||||||||||| |||||||
Sbjct: 514 acgccacacagaatacacatgaaaggcaatccaagcttgcagataaaacttaaacacatt 455
Query: 301 tgtttgtttttaattatttgtgtttatatgtgcacatgtgtgtgtgttctctccaggtac 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tgtttgtttttcattatttgtgtttatatgtgcacatgtgtgtgtgttctctccaggtac 395
Query: 361 acttgtgaaggtcagaggacaatttgcaggagtcagttctcctcttgcaccgtgcaggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 acttgtgaaggtcagaggacaatttgcaggagtcagttctcctcttgcaccgtgcaggtt 335
Query: 421 tcagggatcaaactcaggtcatgcagacacataggcaagtgctcacccactgatccatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcagggatcaaactcaggtcatgcagacacataggcaagtgctcacccactgatccatct 275
Query: 481 ctctagtgcccaagtgatcttttcaaatattttcttgttctatttcgaattgatttttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctctagtgcccaagtgatcttttcaaatattttcttgttctatttcgaattgatttttgt 215
Query: 541 tggtcacatgtctgatttatttgatattgccttctaggttagaattataacatagtatgg 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tgatcacatgtctgatttatttgatattgccttctaggttagaattataacatagtatgg 155
Query: 601 aaaagcaccatgtgctttaagttggttcttttgtgttctgattttctctctacag 655
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 154 aaaagcaccatgtgctttaagttggttcttttgtgttctgattttctgtctacag 100
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
