Query= MSMg01no527_f11.b1 MSMg01no527_f11.b1 CHROMAT_FILE:
MSMg01no527_f11.b1 PHD_FILE: MSMg01no527_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:33 2005
(676 letters)
>mm_chr18_52281047_52282122
Length = 1076
Score = 201 bits (104), Expect = 1e-55
Identities = 113/116 (97%)
Strand = Plus / Minus
Query: 5 gaattcagcattagtgttaattttttggctgtcagcgaactaggcaaaaaagtggcatgt 64
||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 320 gaattcagcatcagtgttaattttttggctgtcagcaaactaggcaaaaaagtgtcatgt 261
Query: 65 gtagggacatcttttcataaaaggtcaaagaacgcattgtctgaatgtgagagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtagggacatcttttcataaaaggtcaaagaacgcattgtctgaatgtgagagtgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_f11.g1 MSMg01no527_f11.g1 CHROMAT_FILE:
MSMg01no527_f11.g1 PHD_FILE: MSMg01no527_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:33 2005
(645 letters)
>mm_chr18_52114262_52115304
Length = 1043
Score = 1073 bits (555), Expect = 0.0
Identities = 633/687 (92%), Gaps = 47/687 (6%)
Strand = Plus / Plus
Query: 1 cattgaggcattttctcacaaacatttccaggaattctcatgctacctggcaagcataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 cattgaggcattttctcacaaacatttccaggaattctcatgctacctggcaagcataac 220
Query: 61 caaaccaagaaacaggatgccttaattagctagacaagagaaaattaagactggtttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 caaaccaagaaacaggatgccttaattagctagacaagagaaaattaagactggtttcag 280
Query: 121 tttttctgcaatctatcggtaatgtagtcagagaaggaaaaaaaaaaccaaaaaaaaaaa 180
||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 281 tttgtctgcaatctatcggtaatgtagtcagagaagaaaaaaaaaaa--aaaaaaaaaaa 338
Query: 181 a--------------cctctgccagcacacaggcaggaaacagtaaaacttgtgccaaca 226
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaaaaaaaaaaaaaacctctgccagcacacaggcaggaaacagtaaaacttgtgccaaca 398
Query: 227 ttatgtaatcatctgcctgccttaactacgaaaacccataattttaaaatccacagttat 286
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 399 ttatgtaatcatctgcctgccttaactatgaaaacccataattttaaaatccacagttat 458
Query: 287 gctgaaaataactgaatgtgtgtgtgtgtgtg---------------------------- 318
||||||||||||||||||||||||||||||||
Sbjct: 459 gctgaaaataactgaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 518
Query: 319 aattttaactcagcctaaatgttctttctattagtttagctaatgaaactataatctatt 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aattttaactcagcctaaatgttctttctattagtttagctaatgaaactataatctatt 578
Query: 379 aaaaaatatgtcatatggctacattgctgttatatatgagacaaagttaaaaatacaatg 438
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aaaaaat--gtcatatggctacattgctgttatatatgagacaaagttaaaaatacaatg 636
Query: 439 atttttaactgtcgttttctagaataatataattattttttacaaatagtataattattt 498
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 637 atttttaactgtcgttttctagaataatataattattttt-acaaatagtataattattt 695
Query: 499 tgagttagatttttaagttagcaagcaaagtaatgcattacatgatgacgttttcagtaa 558
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 696 tgagttagatttttaaattagcaagcaaagtaatgcattacatgatgacattttcagtaa 755
Query: 559 tatataccattgttctttcttcttatccatcttccttccatagcatcctccctaactctc 618
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tatataccattgttttttcttcttatccatcttccttccatagcatcctccctaactctc 815
Query: 619 ctgtctcccacacctccacttttccct 645
||||||||| |||||||||||||||||
Sbjct: 816 ctgtctcccccacctccacttttccct 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1043
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1033
Effective search space: 655955
Effective search space used: 655955
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
