Query= MSMg01no528_g08.b1 MSMg01no528_g08.b1 CHROMAT_FILE:
MSMg01no528_g08.b1 PHD_FILE: MSMg01no528_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:59 2005
(693 letters)
>mm_chr18_72319937_72321029
Length = 1093
Score = 1263 bits (653), Expect = 0.0
Identities = 680/689 (98%)
Strand = Plus / Plus
Query: 5 gaattcatgtcttcttgccttcacagcaagcacttcttttacccactgagtcacgtttta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgtcttcttgccttcacagcaagcacttcttttacccactgagtcacgtttta 264
Query: 65 tgatttcttagcttaaaatttcaccacccaacacagcagaaatgagctccaggcaaatgc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgatttcttagcttaaaatttcaccacccaacacagcagaaatgagctccaggcaaatgt 324
Query: 125 ggaggacttgaattttgctacttaaagaagtgcactgtatctgtaaaatgtaactcagat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaggacttgaattttgctacttaaagaagtgcactgtatctgtaaaatgtaactcagat 384
Query: 185 tctgaaagtccagaagaaaacaaagtaacatcatatttcctattaaaagtcatctaatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctgaaagtccagaagaaaacaaagtaacatcatatttcctattaaaagtcatctaatga 444
Query: 245 ttttctgttgaagcaatgtttaaaatattttgcgctaagcagagttttctacaacacaat 304
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 ttttctgttgaagcaacgtttaaaatattttgcactaagcagagttttctacaacacaat 504
Query: 305 taatatcctgtttcttctactttctctgatatgactactaacaagctacactggcacaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taatatcctgtttcttctactttctctgatatgactactaacaagctacactggcacaca 564
Query: 365 tttctctgtctatattgtctgtctcaagtagtaatacttcttcaatcttcctcatgaaga 424
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 565 tttctctgtctatattgtctgtctcgagtagtaatacttcttcaatcttcttcatgaaga 624
Query: 425 cttcacttgccaaagaactcaacctctgcagggagccatttccccttcttaaagatctaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cttcacttgccaaagaactcaacctctgcagggagccatttccccttcttaaagatctaa 684
Query: 485 gcaaggaaccagttgttctgaggtgaaacctgatttcttgggtttctgaactgaatgctg 544
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 685 gcaaggaaccagttgttctgaggtgaaacctaatttcttgggtttctgaactgaatgctg 744
Query: 545 aatgtatggatcaatcaaatccttaagctaagcactttctggcagattttcaactctttg 604
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 745 aatgtatggatcaatcaaatccttaagctaagcgctttctggcagattttcaactctttg 804
Query: 605 gtggcaccaattgcagtttctcattacttttccaagacaaactctagtatccttttcatg 664
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 805 gtggcaccaattgcagtttctcattacttctccaagacaaactctagcatccttttcatg 864
Query: 665 tcacctttcacaacagatctgaagtttac 693
|||||||||||||||||||||||||||||
Sbjct: 865 tcacctttcacaacagatctgaagtttac 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_g08.g1 MSMg01no528_g08.g1 CHROMAT_FILE:
MSMg01no528_g08.g1 PHD_FILE: MSMg01no528_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:59 2005
(655 letters)
>mm_chr18_72443726_72444780
Length = 1055
Score = 1199 bits (620), Expect = 0.0
Identities = 647/656 (98%), Gaps = 2/656 (0%)
Strand = Plus / Minus
Query: 1 cacaggcttctaatgctaattttctgtattaggaaattatatgccaccaggacaaatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 cacaggcttctaatgctaattttctgtattaggaaattatatgccaccaggacaaatgct 796
Query: 61 ttgccgagaaagacagttcttcttgactttggtaatataagacccttgatgggagaggca 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ttgcccagaaagacagttcttcttgactttggtaatataagacccttgatgggagaggca 736
Query: 121 tagtaatgtgtgaattttgctgacaaaaatatggtattgacttactattccaaaacccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tagtaatgtgtgaattttgctgacaaaaatatggtattgacttactattccaaaacccag 676
Query: 181 agacattcattcatctattaagaaagaaattacagaattaggaatgtagcattttcatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agacattcattcatctattaagaaagaaattacagaattaggaatgtagcattttcatga 616
Query: 241 agtaaatagatatgggcattctagagtaatcatagcttctccatgtcagattaactgcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agtaaatagatatgggcattctagagtaatcatagcttctccatgtcagattaactgcaa 556
Query: 301 ttatggaaaatgctgtcagcaaaatgaagagcagccattctcttaggtaagtaagtggcc 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 555 ttatggaaaatgctgtcagcaaaatggagagcagccattctcttaggtaagtaagtggcc 496
Query: 361 gaaatacacttggaaataaaatgagaaaaattatattcattgattctgtctatctctttc 420
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 495 aaaatacacttggaaataaaatgagaaaaattatagtcattgattctgtctatctctttc 436
Query: 421 tcctcttttct-cttgacacagatttataaaatatttctgtagcatcaaacattctacat 479
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcctctttt-tacttgacacagatttataaaatatttctgtagcatcaaacattctacat 377
Query: 480 tcatatttctgcaactgtgaacttggtgaaggaagaaatcctgctgagattacagagagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcatatttctgcaactgtgaacttggtgaaggaagaaatcctgctgagattacagagagc 317
Query: 540 aaactttgttacgctattactttaacaccaatgcagaaatagtaagaaaatagtgactgt 599
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 316 aaactttgttacactattactttaacaccaatgcagaaatagtaagaaaagagtgactgt 257
Query: 600 acctttattctatcattgttaagagtaaatagatttccccgggtggccctacagtt 655
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 256 acctttattctatcattgttaagagtaaatagatttccccaggtggccctacagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
