Query= MSMg01no531_o06.b1 MSMg01no531_o06.b1 CHROMAT_FILE:
MSMg01no531_o06.b1 PHD_FILE: MSMg01no531_o06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:40 2005
(695 letters)
>mm_chr18_84681055_84682149
Length = 1095
Score = 1299 bits (672), Expect = 0.0
Identities = 687/692 (99%), Gaps = 2/692 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatccattc-ttagcttttatttcctaagggcacactatgtacattcaataaga 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatcca-tcattagcttttatttcctaagggcacactatgtacattcaataaga 263
Query: 64 ggtgagaaaaaggtaaacaaacaaaaaccatattggttttgctttttaaaaacggttcca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtgagaaaaaggtaaacaaacaaaaaccatattggttttgctttttaaaaacggttcca 323
Query: 124 ctatgcaatagtgtctgcatttggtggctgattatgggatggacccctaggtggggcagt 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctatgcaatagtgtctgcgtttggtggctgattatgggatggacccctaggtggggcagt 383
Query: 184 ctctggatggtccatcctttcattttagctacagactttgtctctgcaactcctcccatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctctggatggtccatcctttcattttagctacagactttgtctctgcaactcctcccatg 443
Query: 244 gatattttattccgtattctagggaaaaatgaagtatccacgcgttggtcttccttcttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gatattttattccgtattctagggaaaaatgaagtatccacgcgttggtcttccttcttc 503
Query: 304 attttcttgtgttttcgaagttgtatcttgggtattctattctaggtttctgggctaata 363
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 504 attttcttgtgttttcgaagttgtatcttgggtattctattctaggtttctaggctaata 563
Query: 364 tctacttatcagtgagtgcatatcaagtgacttcttttgtgattgggttacctcactcag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctacttatcagtgagtgcatatcaagtgacttcttttgtgattgggttacctcactcag 623
Query: 424 gatgatatcctccagatacatccatttgcccaagaatttcataaattcattgtttttaat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gatgatatcctccagatacatccatttgcccaagaatttcataaattcattgtttttaat 683
Query: 484 agctgagtagtactccattgtgtaaatgtaccacattttctgtatccattcctctgttga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agctgagtagtactccattgtgtaaatgtaccacattttctgtatccattcctctgttga 743
Query: 544 gggacatctgggttctttccagattctggctattataaatagagctgctatgtacatagt 603
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 744 gggacatctgggttctttccagattctggctattataaatagagctgctatgcacatagt 803
Query: 604 ggagcatgtgtccttattactggttggaacatcttctgggtatatgcaaaggagaggtat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ggagcatgtgtccttattactggttggaacatcttctgggtatatgcaaaggagaggtat 863
Query: 664 tgctggatctagcagtagtactatgtctagtt 695
||||||||||||||||||||||||||||||||
Sbjct: 864 tgctggatctagcagtagtactatgtctagtt 895
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_o06.g1 MSMg01no531_o06.g1 CHROMAT_FILE:
MSMg01no531_o06.g1 PHD_FILE: MSMg01no531_o06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:40 2005
(514 letters)
>mm_chr18_84847702_84848615
Length = 914
Score = 986 bits (510), Expect = 0.0
Identities = 513/514 (99%)
Strand = Plus / Minus
Query: 1 ttgttaaggactgttaaaagacataatcttaagccctacaacgcaggctgacggatgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 714 ttgttaaggactgttaaaagacataatcttaagccctacaacgcaggctgatggatgaca 655
Query: 61 acagacaagaccatcccagctaggtttcagaacagcttcgagacattcccagtttattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 acagacaagaccatcccagctaggtttcagaacagcttcgagacattcccagtttattaa 595
Query: 121 ccagactgccctcccttgctccctcccgctcagctcccagatggctcggagataccactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ccagactgccctcccttgctccctcccgctcagctcccagatggctcggagataccactt 535
Query: 181 cctcccattctgctgggcaagctaggcagcgacccccagaagaaaaccgtgtgcatttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cctcccattctgctgggcaagctaggcagcgacccccagaagaaaaccgtgtgcatttac 475
Query: 241 gggcacctggacgtgcagcctgcggccctggaggacgggtgggacagcgagcccttcacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gggcacctggacgtgcagcctgcggccctggaggacgggtgggacagcgagcccttcacc 415
Query: 301 ttggtggagcgggaaggtgagggcaccagggcttgcccacccaagggctcactttccaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttggtggagcgggaaggtgagggcaccagggcttgcccacccaagggctcactttccaaa 355
Query: 361 tcagaggagtcctttttggaggtgttacatttggaaaaccactaatattctcctgggtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tcagaggagtcctttttggaggtgttacatttggaaaaccactaatattctcctgggtct 295
Query: 421 ttctcttactagcacacgtttgtttcatgaagaacaaaatctagaaattgggttctggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttctcttactagcacacgtttgtttcatgaagaacaaaatctagaaattgggttctggaa 235
Query: 481 gtttctcatttgtgcctcatttattgaaaactca 514
||||||||||||||||||||||||||||||||||
Sbjct: 234 gtttctcatttgtgcctcatttattgaaaactca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
