AGGGTGTCTCAAATTGGGCGGCAAGATCCTTTTGGAGAGCCGGGAACTGT
AAATATTTTTGGGTCCCTCACGCAAAAGGGAAACCTCTTTTTCCTTTCCA
TGGGGCCCGGGTGCAATTATGGAAAATCTGTCTCTGGAAAAAATAATATA
TACCCCCCCTTTCGCGGCTGGGGGTGTCTTCCATTTTTTGTACTTCATAA
AAAACACTTTTTTCCCTTTCGCGGTCCTTTTCCCCCCGAATTTTTTTTTT
TTTTCCTTTTCCCCTCATTCTCCCTTTTCTTATTAACTACCTCCCACCCC
CCTCTTTTTTTCTTTACCCCGATTTTTGCATCCACCTTTTATTTTTTTTT
TTTCACCCCCCCCCCTTTTTATCCCTTTTTTTTCCTTTTTTCCCAAATAT
TTTACCTTTTTTGTGTTTTCTTTTTTATGGTCTCTCCCGTTACCTCTTCC
ACGTTTATTATAAGCGGTTTTTTACCTTATTCCCCTTTTCCCCCTCATCC
TTTTTTCACTGATTTTCATAAGACACCTCCCTCCTACATATATCCCCACT
TATTTTTATACCCTCCCCCCCCCCTTATCCCTTTCTCCCCTTCCCTTTTT

NNCTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGTTTATCTTTATAACCAAG
GATATAGAATCTTATGTGGAGACCCAGAATCTTCAGTAAGAGAGAGATAA
AGAGCATACTCCTGCAAACTGTGAAAACCTTGTATCCTGCCGTTCCTTCA
TTACTCAATTCATGCTCTCTTCTTAATTATTGCCACACCCATACATGCAA
ACACATACATACACACACCCTGCTGACTCCATTTAGTATTGTGCGTATCT
GTGTAAAGTTAACCACTTGGAACTGCATGAACTATCAGGAAATGTCCGTG
GAGAAGATTGACTACCTTTCATAAAGGGCATTTATTAACTTCAGATATTC
GTCTAAGGGTGGGGCCTTGTGATATGTCTCCCATATAATTTGGGCTTCCA
ACCGATGTCATCATTGCCCAGGTCTTGTTTCAGCAACCATAGTGTCATTT
CATGGGTACAAGTTCTTGTCACATATATAAGACCCTTTGTAGACGTGCTT
AGCCTCTGGCTTTTTGAATGTTTCTCTGCATCCAGAGATGAACCCTAGGT
GTAGAAGTTGTGTTGTAGATGTATCAGCTAGGCTTGGGCAACCCCATAGT
CAGTTCTCTACATGTAGACCAGTTGTAGACTTCTGCAATTACCTCTGTGT
GCTGTCCAAAGAAGATTTTTTGATGAGAGGTGAGAGC

Query= MSMg01no533_m08.g1 MSMg01no533_m08.g1 CHROMAT_FILE:
MSMg01no533_m08.g1 PHD_FILE: MSMg01no533_m08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:04 2005
         (593 letters)



>mm_chr18_87360275_87361267
          Length = 993

 Score = 1131 bits (585), Expect = 0.0
 Identities = 591/593 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgtttatctttataaccaaggatatagaatcttatgtggagacccagaatcttcagta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgtttatctttataaccaaggatatagaatcttatgtggagacccagaatcttcagta 260

                                                                       
Query: 61  agagagagataaagagcatactcctgcaaactgtgaaaaccttgtatcctgccgttcctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagagataaagagcatactcctgcaaactgtgaaaaccttgtatcctgccgttcctt 320

                                                                       
Query: 121 cattactcaattcatgctctcttcttaattattgccacacccatacatgcaaacacatac 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattactcaatttatgctctcttcttaattattgccacacccatacatgcaaacacatac 380

                                                                       
Query: 181 atacacacaccctgctgactccatttagtattgtgcgtatctgtgtaaagttaaccactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacacacaccctgctgactccatttagtattgtgcgtatctgtgtaaagttaaccactt 440

                                                                       
Query: 241 ggaactgcatgaactatcaggaaatgtccgtggagaagattgactacctttcataaaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaactgcatgaactatcaggaaatgtccgtggagaagattgactacctttcataaaggg 500

                                                                       
Query: 301 catttattaacttcagatattcgtctaagggtggggccttgtgatatgtctcccatataa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catttattaacttcagatattcgtctaagggtggggccttgtgatatgtctcccatataa 560

                                                                       
Query: 361 tttgggcttccaaccgatgtcatcattgcccaggtcttgtttcagcaaccatagtgtcat 420
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcggcttccaaccgatgtcatcattgcccaggtcttgtttcagcaaccatagtgtcat 620

                                                                       
Query: 421 ttcatgggtacaagttcttgtcacatatataagaccctttgtagacgtgcttagcctctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcatgggtacaagttcttgtcacatatataagaccctttgtagacgtgcttagcctctg 680

                                                                       
Query: 481 gctttttgaatgtttctctgcatccagagatgaaccctaggtgtagaagttgtgttgtag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gctttttgaatgtttctctgcatccagagatgaaccctaggtgtagaagttgtgttgtag 740

                                                                
Query: 541 atgtatcagctaggcttgggcaaccccatagtcagttctctacatgtagacca 593
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgtatcagctaggcttgggcaaccccatagtcagttctctacatgtagacca 793


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space:   573089
Effective search space used:   573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)