TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CATTGTTCTGAAAATCAGGTCCCATGAGGGCAGGGGCTTGCCCTTTGCTC
TTTTCTAGGCCCCTAATCTGTGACATCTACAGTAGACTCAAAGTTTTCTG
GGCTGAAGATGAGTGAAGGATGCCTAGTGCTGGCTGCATGATATCCCTCA
CTCTTGTCATTCTTAGGAGATCAGAAACAGGAGCTGGTGGCTTTTCACCG
CCTGGCGACTGTGTACTTCTCTCTGAACATGTATGAGATGGCTGAAGACT
GCTACCTGAAGACTCTGTCCCTGTGCCCACCATGGCTGCAGAGTCCCAAG
GAGGCGCTGTACTATGCCAAGGTCTATTGTCGCCTTGGCCGACTCACTTT
CTACCAACTGAAGGTAAGAGGCTGTCTTCCATGATGGATTATTATTATTA
TTATTATTATCATCATCATCATCATCATCATTATTATTAATTTTGAGAGC
TACTTTCCAGCCACTCTTTGCTGAGATAGTTAGCGAGGGGACTTTGGAGT
AGAAGTGAGAGGAATAGGGGGCCAAGACGATCAGGCTTTATTCACAGGGT
AGGAAATGGTTTCTCTGGGGACATGAGGACTTTTTCTGTTAAGCCCCACT
GAGAAGAAAGGTCACACCTTTCCTCTGCTATAATGCCTGTGAAAACTTTA
ATGTCAACAGCACCACATTTCATATAAAG

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGGACTCCATTTTTAATAGG
GTTATTTGGTTCTCTGGCGTCTAACTTCTTGAGTTCTTTGTATATATTGG
ATATTAGCCCTCTAGGGTTAGTAGGGTTGGAAAAGGTTTTTCCCAATCTG
TTGGTTGCCATTTTGTCCTATTGACAGTGTCCTTTGCCTTACAGAAGCTT
TGTAATTTTATGAGGTCCCATTTGTCAATTCTTTATCTTAGAGCATGAGC
TATTGGTGTTCTGTTCAGAAAAATTTCCCCTTGATGTCAGGGATGAGGAT
TCCCCCAGAAGTTCTTTTATTGTTGAGTTTTTTTTTTTTTTATTCCAGAT
GAATTTGGAAATTGCTCTTTCTAACACTATGAAGAATTGATTTGGAATTT
TGATGGGGATTGCACTGAATCTGTAGATTGCTTTCTGCAAATGGCCATTT
TTACTATATTAATCCTACCAATCCATGAGCATGGGAGATCTTTCCATCTT
CTGAGATCTTCCATTTCTTTCTTCAGAGACTTGAAGTTCTTGTCATACAG
ATCTTTCACTTGCTTAGTTAGAGTCACACCAAGGAGTTTGCAGCCCCACA
GGAGGAGCAACAATATGAACCAACCAGTACGCCCCAGAGCTCCCATGGAC
GAAACCACCAATCATAGAGAA

Query= MSMg01no534_c06.b1 MSMg01no534_c06.b1 CHROMAT_FILE:
MSMg01no534_c06.b1 PHD_FILE: MSMg01no534_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:32 2005
         (664 letters)



>mm_chr18_62172318_62173380
          Length = 1063

 Score = 1154 bits (597), Expect = 0.0
 Identities = 649/669 (97%), Gaps = 10/669 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcattgttctgaaa-atcaggtcccatgagggcaggggcttgccctttgctcttt 62
           ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 197 ggaattcattgttctgaaacatcaggtcccatgagggcaggggcctgccctttgctcttt 256

                                                                       
Query: 63  tctaggcccctaatctgtgacatctacagtagactcaaagttttctgggctgaagatgag 122
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 257 tctaggcccctaatctgtgacatctagagtagactcaaagttttctgggctgaagatgag 316

                                                                       
Query: 123 tgaaggatgcctagtgctggctgcatgatatccctcactcttgtcattcttaggagatca 182
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgaaggatgcccagtgctggctgcatgatatccctcactcttgtcattcttaggagatca 376

                                                                       
Query: 183 gaaacaggagctggtggcttttcaccgcctggcgactgtgtacttctctctgaacatgta 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaaacaggagctggtggcttttcaccgcctggcgactgtgtacttctctctgaacatgta 436

                                                                       
Query: 243 tgagatggctgaagactgctacctgaagactctgtccctgtgcccaccatggctgcagag 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgagatggctgaagactgctacctgaagactctgtccctgtgcccaccatggctgcagag 496

                                                                       
Query: 303 tcccaaggaggcgctgtactatgccaaggtctattgtcgccttggccgactcactttcta 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcccaaggaggcgctgtactatgccaaggtctattgtcgccttggccgactcactttcta 556

                                                                       
Query: 363 ccaactgaaggtaagaggctgtcttccatgatggattattattattattattattatcat 422
           ||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||
Sbjct: 557 ccaactgaaggtaagaggctgtcttccatgatggattattactattattatcatcatcat 616

                                                                       
Query: 423 catcatcatcatcatcat--t----attattaattttgagagctactttccagccactct 476
           ||||||||||||||||||  |    |||||||||||||||||||||||||||||||||||
Sbjct: 617 catcatcatcatcatcatcatcatcattattaattttgagagctactttccagccactct 676

                                                                       
Query: 477 ttgctgagatagttagcgaggggactttggagtagaagtgagaggaatagggggccaaga 536
           ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 677 ttgctgagatagttagcaaggggactttagagcagaagtgagaggaatagggggccaaga 736

                                                                       
Query: 537 cgatcaggctttattcacagggtag-gaaatggtttctctggggacatgaggactttttc 595
           ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||
Sbjct: 737 cgatcaggctttattcacagggtagagaa-tggtttc-ctggggacatgaggacattttc 794

                                                                       
Query: 596 tgttaagccccactgagaagaaaggtcacacctttcctctgctataatgcctgtgaaaac 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tgttaagccccactgagaagaaaggtcacacctttcctctgctataatgcctgtgaaaac 854

                    
Query: 656 tttaatgtc 664
           |||||||||
Sbjct: 855 tttaatgtc 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1063
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1053
Effective search space:   688662
Effective search space used:   688662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)