NNCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCC
CCTATCTGATTTAGGATATGTAAAGATCCTTTCCCAATCTGTTGGTGGTC
TCTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTC
ATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGT
TCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCA
CTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTG
ATCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATCCA
TACTTATCTCCTCCTTTCATCTTAAAAGAACATAGTTAAAAGATATCTTA
TACTTCAATAGTGATTCTGGAGCCAAACAGACTAGGCACCACTGGGTTGG
TTAACACAATGACTCAAGAATGTCTCTCTTCTTTCTGAGTAGGCTTTTTG
ACTTGCATATGCTTTTTGCTGCCAAGAGAAGGAGTAATTATTTACCTGCC
TATCCCCTTGGTAGTTCACAGGACATACATTGTAATCCAAGTTTCTATTA
TAGATGCAGACAACTCTTATTTATTACTCTTGTAGGTCAAGGCACGGTCT
ACATGATGTGAAAGT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCAGAGGCTAAGCCACCAACCAAGGAGC
ATATATGGGCTGGTCCATGCCCCCTGGCACATATGTGGCAGAAGACTGCC
TTGTCTAGTCTTAGTGGGAAAGTATGCACCTAATCCTATAGAGACTTGCT
GACCCAGGGAAGGGGGATGCTGAAGGCATATTGGTGGGGGAGTAGAGGAG
CACCCCCTCAAAGGCAAATGGGGAATGGGGTGGAGAATTCTGAAATGGGG
ACTGGGAAGGGTGGCAATATTTGGAAGGTAACTAAAAAAAATAATGTTTT
TTAAAAAAACATTTAATACCTGCTGTTCTGAAGATGATCAAAACAACTAT
GCATGAAGAAGTTATAGGACCTAGGGAGAACCTATTGATGTTACTTTTCT
AAGTGGTTATGTTGGCAAACTGCCATCTCCATGGTGATTTTTATGTCTAT
AGATTTGTATTCCCCCTCCCACTTTTGGTCAGAGCTACATCCTATTACAG
TGGTTAGTGGTTAGTGCAGAGGCTCATTACTGTTCACAGAATCACTGCTC
ACAGAATAAAGCAATGGTAAATGATCAGCTGTATGTGAGTCATCTATATC
AACTTTCTTTCCCCAGGGCTCAGAGATCAAAAATATCGAAATTTGGACTC
AAACAATGTAGAAGCTGGAGAATGTGGAGAAGTATTGTGTAATACTGTCA
TCTGGACAG

Query= MSMg01no541_f16.b1 MSMg01no541_f16.b1 CHROMAT_FILE:
MSMg01no541_f16.b1 PHD_FILE: MSMg01no541_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:58 2005
         (656 letters)



>mm_chr18_86428164_86429219
          Length = 1056

 Score = 1230 bits (636), Expect = 0.0
 Identities = 648/652 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttgttcagttctgagccccattttttaatggggttatttgattttctgaagtc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgttcagttctgagccccattttttaatggggttatttgattttctgaagtc 264

                                                                       
Query: 65  caccttcttgagttctttatatatgttggatattagtcccctatctgatttaggatatgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 caccttcttgagttctttatatatgttggatattagtcccctatctgatttaggataggt 324

                                                                       
Query: 125 aaagatcctttcccaatctgttggtggtctctttgtcttattgacggtgtcttttgcctt 184
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 aaagatcctttcccaatctgttggtggtctctttgtcttattgaaggtgtcttttgcctt 384

                                                                       
Query: 185 gcagaaactttggagtttcattaggtcccatttgtcaattctcgatcttacagcacaagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagaaactttggagtttcattaggtcccatttgtcaattctcgatcttacagcacaagc 444

                                                                       
Query: 245 cattgctgttctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cattgctgttctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac 504

                                                                       
Query: 305 tttctcctctataagtttcagtgtctctggttttatgtgaagttctttgatccatttaga 364
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttactcctctataagtttcagtgtctctggttttatgtgaagttctttgatccatttaga 564

                                                                       
Query: 365 tttgaccttagtacaaggagataagtatggatcgatccatacttatctcctcctttcatc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 tttgaccttagtacaaggagataagtatggatcgatccatacttatctccttctttcatc 624

                                                                       
Query: 425 ttaaaagaacatagttaaaagatatcttatacttcaatagtgattctggagccaaacaga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttaaaagaacatagttaaaagatatcttatacttcaatagtgattctggagccaaacaga 684

                                                                       
Query: 485 ctaggcaccactgggttggttaacacaatgactcaagaatgtctctcttctttctgagta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctaggcaccactgggttggttaacacaatgactcaagaatgtctctcttctttctgagta 744

                                                                       
Query: 545 ggctttttgacttgcatatgctttttgctgccaagagaaggagtaattatttacctgcct 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggctttttgacttgcatatgctttttgctgccaagagaaggagtaattatttacctgcct 804

                                                               
Query: 605 atccccttggtagttcacaggacatacattgtaatccaagtttctattatag 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atccccttggtagttcacaggacatacattgtaatccaagtttctattatag 856



 Score = 72.3 bits (37), Expect = 1e-16
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                
Query: 379 aaggagataagtatggatcgatccatacttatctcct 415
           |||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaggagataagtatggatcgatccatacttatctcct 580


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)