CCGATTTCTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCTCAGTTACCTGACCCACAGTATATAGATGCTACATG
CACAGTGTTAGCTGTCTTTATTGATCTCCTCAAATGATTAATTGGGAAAA
AAAGAAAACATCAATTTTGAACTCTAATGCCCTTAAGTTATTATCAGTTA
GGGACCGAGTCCCACATGCCTTGGTGTTTTAACCTGAATAAGGGAGAGAT
GGAATGAAGAATGGACCAGATGCCAAGACACATACACACAGAAAATCTGT
TATCCCTTAGGGTATATACACTCAGATGGAGTGGTTTAACTACTGCAACA
ACCAAGAACTTCACCTTGTTAGTTACATACAATGCATGTTGGGGGTGGGG
TGGGCTGATATAAGTTAGAACTTTCAGCCTCTAAATATCCAGGAGGAGAA
ACCTTTGTTAGTTTTTGAAGTACACTGCAAACATTCATGTTGGGACCACA
GGAAAGCTTTGTCAATTCTGAGCCTAACCTACATGGGGAAGGCTTTGCTA
ATTCCCAAAAGGCCTAAAACATTGGTCCCATGTCAGTCATACAAGTTCAC
TGTAGACTCTGTTACTTATACATTAAGTCAGGGCTTTCTCAGCTCCCCTA
ATGTACTGAAGAAACTTCCATTTATCAAGTGCCATTGACAAAATTAGTGG
CTGCCTTTAATAACTTTTAGTATTTGGATGACTTTAATTAG

AAAATTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAATTCTGAGT
CCCATTTTTTAATGGGGTTATTTGATTTTTTGGAGTCTACCTTCTTGATT
ACTTTATATATATATTGTATATTAGTCCCCTATCTGATTTAGGATAGGTA
AAGATCCTTTCCCAATCTTTTGGTGGCCTTTTTGTCTTATTGACGGTGGC
TTATGCCTTACAGAAGATTTGCAATTTTATCAGGTCTCATTTGTCCATTC
TTGATCTTACAGCACCAACCATTGCTGTACTATTCAGGAATTTTTCCCCT
GTGACCATCTCTTCGAGGCTTTTCCCCACTTTATCCTCTATAAGTTTCAG
TGTCTCTGGATTTTTGTGGAATTCCTTAATCCACTTAGATTTGACATTAT
TACAAGGAGATAGGAATGGATCAATTCACATTCTTCTGCATGATAACCGC
CAGTTGTGCTAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGAT
GGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCA
TTTCTGGGTCTTCAATTCTATTCCATTGATCTACTTTTCTGTTGCTATAC
CAGTATCATGCAATTTTTATCACAATTGCTCTGTAGTACAGCTTTAGGTC
ATGCATGGTGATTCCACCAGAAGTTCTTCTATCCTTAAGATTTTTTGCTA
TTCTAG

Query= MSMg01no543_l05.b1 MSMg01no543_l05.b1 CHROMAT_FILE:
MSMg01no543_l05.b1 PHD_FILE: MSMg01no543_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:09 2005
         (654 letters)



>mm_chr18_87203334_87204387
          Length = 1054

 Score = 1234 bits (638), Expect = 0.0
 Identities = 647/650 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctcagttacctgacccacagtatatagatgctacatgcacagtgttagctgtc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gaattctctcagttacctgacccacagtatatagatgctacatgcacagtgttagctgtc 795

                                                                       
Query: 65  tttattgatctcctcaaatgattaattgggaaaaaaagaaaacatcaattttgaactcta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tttattgatctcctcaaatgattaattgggaaaaaaagaaaacatcaattttgaactcta 735

                                                                       
Query: 125 atgcccttaagttattatcagttagggaccgagtcccacatgccttggtgttttaacctg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 atgcccttaagttattatcagttagggaccgagtcccacatgccttggtgttttaacctg 675

                                                                       
Query: 185 aataagggagagatggaatgaagaatggaccagatgccaagacacatacacacagaaaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aataagggagagatggaatgaagaatggaccagatgccaagacacatacacacagaaaat 615

                                                                       
Query: 245 ctgttatcccttagggtatatacactcagatggagtggtttaactactgcaacaaccaag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctgttatcccttagggtatatacactcagatggagtggtttaactactgcaacaaccaag 555

                                                                       
Query: 305 aacttcaccttgttagttacatacaatgcatgttgggggtggggtgggctgatataagtt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 554 aacttcaccttgttagttacatacaatgcatgttgggggtggggtgggctgatataagtg 495

                                                                       
Query: 365 agaactttcagcctctaaatatccaggaggagaaacctttgttagtttttgaagtacact 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agaactttcagcctctaaatatccaggaggagaaacctttgttagtttttgaagtacact 435

                                                                       
Query: 425 gcaaacattcatgttgggaccacaggaaagctttgtcaattctgagcctaacctacatgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gcaaacattcatgttgggaccacaggaaagctttgtcaattctgagcctaacctacatgg 375

                                                                       
Query: 485 ggaaggctttgctaattcccaaaaggcctaaaacattggtcccatgtcagtcatacaagt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 374 ggaaggctttgctaattcccaaaaggcctaaaacattggtcccatgtcattcatacaagt 315

                                                                       
Query: 545 tcactgtagactctgttacttatacattaagtcagggctttctcagctcccctaatgtac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 314 tcactgtagactctgttacttatacattaagtcagggctttctcagctcccctaaggtac 255

                                                             
Query: 605 tgaagaaacttccatttatcaagtgccattgacaaaattagtggctgcct 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgaagaaacttccatttatcaagtgccattgacaaaattagtggctgcct 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)