BAC Information

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BAC

Clone NameB6Ng01-008H03
Chromosome19 (Build37)
Map Location 13,444,206 - 13,445,362
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467
Downstream geneOlfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
LinkOpen Mouse BAC browser

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BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008H03.bB6Ng01-008H03.g
ACCDH844700DH844701
length1,1361,167
definitionDH844700|Mus musculus domesticus DNA, BAC clone: B6Ng01-008H03, 5' end.DH844701|Mus musculus domesticus DNA, BAC clone: B6Ng01-008H03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagcagagaattctgtgttcttataaagtagaagaagcaagga
aaaaaagagcttagctagttctctaagaggccatctacatgtgcattgtt
tcatgaagatgtgggaagggtttcattgactcctttgagaatgaaaggca
cactgaagacaatttcacctactgagaagctattctgagagcctcattta
ttaattaagtttgaggcttagattccaacatataaatttttataaaattc
atgatttcaaagcatagcatacatttcctgatatctgtagtgtacttaaa
taatgtattattagctcccaatcattgtatttcatgctttaatatcgtta
agtaacattatggtttgtcatgttctctttcccactgaatatagattcat
tggtgcttgatacacttttgaatgttaagcccttaaacaccagaaacaat
tcaatatgagttcatctctaaaagtatggccttcaagtcccaatcttaca
atcaaattctggttaggtagtgatataaacaccccttgaattttcattta
tttattataaagaatcagcttttctggttatggagtatgaaaaggtcaca
tgtacaagtatgccagaatgcttgaggttaaataaagcaaatgctgctga
aaatttgtcctacacaactacattttctttctttatgttctttactcatg
aaccaatatatttatgtattttattttcagtaaaagtttaataataatat
cttatatactacttaaactttacagaaaaatttcaatctaaaactactat
aacattacttagttttaggttggcattcgctgttacttttcactgttact
gtattcttaattcattgcagctttttattttaagactattttatttttca
gaatttattattataagtgagtgtgtgcacattgtgtatgtgtgtgtatg
tggtgggtgtgcaaatacatatatgtggttcatgtgacagtagagtccaa
tggcatcacatttccctagaatggaattacagacattgtcatctcctgac
tgttgctggacaaattcgatcttctgcagattatagtgggtttacacctg
aacaaatctcagccctatttgtaactaactgataca
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactaggccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagctaaggagctaaagggatctgcacccta
tagtggaacaacattatgagctaactagtactccggagctctgacttcta
gctgcatatatatcaaagatgctagtcgcatcactggaagagagctcatg
ggactgcaacttatatgcccattcgggatatccagcccaaaggggaatgg
gttgccgggagatgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13444206_13445362
seq2: B6Ng01-008H03.b_43_1178

seq1  GAATTCACAGCAGAGAATTCTGTGTTCTTATAAAGTAGAAGAAGCAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCAGAGAATTCTGTGTTCTTATAAAGTAGAAGAAGCAAGGA  50

seq1  AAAAAAGAGCTTAGCTAGTTCTCTAAGAGGCCATCTACATGTGCATTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAGCTTAGCTAGTTCTCTAAGAGGCCATCTACATGTGCATTGTT  100

seq1  TCATGAAGATGTGGGAAGGGTTTCATTGACTCCTTTGAGAATGAAAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAGATGTGGGAAGGGTTTCATTGACTCCTTTGAGAATGAAAGGCA  150

seq1  CACTGAAGACAATTTCACCTACTGAGAAGCTATTCTGAGAGCCTCATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAAGACAATTTCACCTACTGAGAAGCTATTCTGAGAGCCTCATTTA  200

seq1  TTAATTAAGTTTGAGGCTTAGATTCCAACATATAAATTTTTATAAAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAAGTTTGAGGCTTAGATTCCAACATATAAATTTTTATAAAATTC  250

seq1  ATGATTTCAAAGCATAGCATACATTTCCTGATATCTGTAGTGTACTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTCAAAGCATAGCATACATTTCCTGATATCTGTAGTGTACTTAAA  300

seq1  TAATGTATTATTAGCTCCCAATCATTGTATTTCATGCTTTAATATCGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTATTATTAGCTCCCAATCATTGTATTTCATGCTTTAATATCGTTA  350

seq1  AGTAACATTATGGTTTGTCATGTTCTCTTTCCCACTGAATATAGATTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACATTATGGTTTGTCATGTTCTCTTTCCCACTGAATATAGATTCAT  400

seq1  TGGTGCTTGATACACTTTTGAATGTTAAGCCCTTAAACACCAGAAACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTTGATACACTTTTGAATGTTAAGCCCTTAAACACCAGAAACAAT  450

seq1  TCAATATGAGTTCATCTCTAAAAGTATGGCCTTCAAGTCCCAATCTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATGAGTTCATCTCTAAAAGTATGGCCTTCAAGTCCCAATCTTACA  500

seq1  ATCAAATTCTGGTTAGGTAGTGATATAAACACCCCTTGAATTTTCATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATTCTGGTTAGGTAGTGATATAAACACCCCTTGAATTTTCATTTA  550

seq1  TTTATTATAAAGAATCAGCTTTTCTGGTTATGGAGTATGAAAAGGTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATAAAGAATCAGCTTTTCTGGTTATGGAGTATGAAAAGGTCACA  600

seq1  TGTACAAGTATGCCAGAATGCTTGAGGTTAAATAAAGCAAATGCTGCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAGTATGCCAGAATGCTTGAGGTTAAATAAAGCAAATGCTGCTGA  650

seq1  AAATTTGTCCTACACAACTACATTTTCTTTCTTTATGTTCTTTACTCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTCCTACACAACTACATTTTCTTTCTTTATGTTCTTTACTCATG  700

seq1  AACCAATATATTTATGTATTTTATTTTCAGTAAAAGTTTAATAATAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATATATTTATGTATTTTATTTTCAGTAAAAGTTTAATAATAATAT  750

seq1  CTTATATACTACTTAAACTTTACAGAAAAATTTCAATCTAAAACTACTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATACTACTTAAACTTTACAGAAAAATTTCAATCTAAAACTACTAT  800

seq1  AACATTACTTAGTTTTAGGTTGGCATTCGCTGTTACTTTTCACTGTTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTACTTAGTTTTAGGTTGGCATTCGCTGTTACTTTTCACTGTTACT  850

seq1  GTATTCTTAATTCATTGCAGGCTTTTTATTTTAAGACTATTTTATTTTTC  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTATTCTTAATTCATTGCA-GCTTTTTATTTTAAGACTATTTTATTTTTC  899

seq1  AAGAATTTATTATTATAAGTGAGTGTGTGCACATTTGTGTATGTGTGTGT  950
       |||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  -AGAATTTATTATTATAAGTGAGTGTGTGCACA-TTGTGTATGTGTGTGT  947

seq1  ATGT-GTGGGTGTGCAAATACATATATGTTGGTTCATGTGACAGTAGAGT  999
      |||| ||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATGTGGTGGGTGTGCAAATACATATATG-TGGTTCATGTGACAGTAGAGT  996

seq1  CCAATGGCATCACA-TTCCCTAGAATTGGAATTACAGACAATTGTCATCT  1048
      |||||||||||||| |||||||||| ||||||||||||| ||||||||||
seq2  CCAATGGCATCACATTTCCCTAGAA-TGGAATTACAGAC-ATTGTCATCT  1044

seq1  CCCTGACGTGTTGCTTGGGACCAAATCTGATCCTCTGCCAGAATAATAAG  1098
       |||||| |||||||  ||| |||||  |||| |||| |||| ||   ||
seq2  -CCTGAC-TGTTGCT--GGA-CAAATTCGATCTTCTG-CAGATTA--TAG  1086

seq1  TGGGTTTAACACCTGAACAATATCTCTAGCCACCTAAATTTTGATCATTA  1148
      ||||||| |||||||||||| ||||| |||  ||||   |||| | | ||
seq2  TGGGTTT-ACACCTGAACAA-ATCTC-AGC--CCTA---TTTG-TAACTA  1127

seq1  ACTGATACA  1157
      |||||||||
seq2  ACTGATACA  1136