BAC Information

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BAC

Clone NameB6Ng01-014M02
Chromosome19 (Build37)
Map Location 56,947,958 - 57,091,399
singlet/doubletdoublet
Overlap geneVwa2, Afap1l2
Upstream geneTcf7l2, LOC100043484, Habp2, Nrap, Casp7, 9930023K05Rik, Dclre1a, Nhlrc2, Adrb1, EG629643, A630007B06Rik, 1700010L13Rik, Tdrd1
Downstream geneAblim1, EG668259, AI450540, Trub1, LOC100043038, Atrnl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014M02.bB6Ng01-014M02.g
ACCDH849209DH849210
length803974
definitionDH849209|Mus musculus domesticus DNA, BAC clone: B6Ng01-014M02, 5' end.DH849210|Mus musculus domesticus DNA, BAC clone: B6Ng01-014M02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,947,958 - 56,948,760)(57,090,826 - 57,091,399)
sequence
gaattcttgtatataacttgtagtctaggaaatttactagtttccaaatg
taattgggccgccccaccgagatacctgattggagtgttaaacttaaggc
ctcagcattaagcagtagcaaatggtgtatataggtagagcagagttaca
acggcccaaactgcagatgttcaactcaggtgtggatgatcaagcatcaa
tggaagaaactaaggttttgaaggaggaaatgaaagcttttccccagtgg
tctgcagctgagtaccagtggcttttctatttgctttctcttgttttcta
ttttgtaaacttttccaatgagcacacaatatgtagttttgattaagtat
aaaaatgatttgagggtttatctgcacggagcacctgccagaagggacac
cgttgtttgttctgtgacaaatacctggcaccctctaagttaaaaggcga
atgctgcccaataaccactcacctgcaagaactaacaggccggttggcaa
aaagcagaagacaaatggaaacgatgccaaagtcaacatttcctcaaggg
tggaatcgataaaacctgcggagtagccaacactctcttgtgaccacagc
cgcaccgcttgcagcggccaggtcgctcggaagtgttgatgatgctgcgg
tccgtgggtcgtggggtcgcgggtcgccgggcagggcaagggacgaggcg
ggtgcggtccctggagcattattgcgccgccctcacgccgaactccggat
cctcacaggttgcatccgatcggccccgtcccgcctctgctgggagagac
caa
gaattcatgcactgcactacccaggatcccggctagtaagatgtgtgttg
ttagggtgtcactcaccaaataagctgtcttagtctgtgttctattgctg
tgaagagactccatgaccacggcaactcttgtaaaagcaagcatttaatt
ggagcttgccttgtcatcttcattggcaaggcagggagcatggtggcacc
caggcagacatggtgctggagaaggtgctgggagttctacatccagatca
gcaggcggcaggaagacagagacactggccctggaccgagcttctgaaac
ctcaaagttacaccagttatacacttcctccaactacccaagcagttaca
cacctcttctactactacagcaaggccacacccaacccctctcatgtagt
gtccccaatgacagagtattcaaacacctgagtctacgggagccattcct
attcaaaccacccagccagaggggttagctcctgctgggtcactacacag
gtcttcatactagctgtcttttagcaatctcagattaaaggcatgtaaag
tctgctgtaaagtggggtgccaacacttaccaagtattcaccatgtaatc
cttacaacaaactgggaggggggcacaggtatcattttattttcatttca
atggggaaatggagaacatttcaatggagaactgttaagtcgttcaaggt
cacccagctagaaagaaacagaaggaagactttaacctaaactcccaggc
ctgtgagccaatgtttcccaatgttttgtctgtcgctgcttcctctgagg
agtcctttgcatattttatgctaatcatgcctccatgaaatgtttaatgt
catatatatacattggtatatgtatttatgtactggtgatattttatacc
ttccctcagatccattcttttaaagacaggatgtcactatgtagcctcag
ctggccttgaaatcccagtgctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_56947958_56948760
seq2: B6Ng01-014M02.b_33_835

seq1  GAATTCTTGTATATAACTTGTAGTCTAGGAAATTTACTAGTTTCCAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTATATAACTTGTAGTCTAGGAAATTTACTAGTTTCCAAATG  50

seq1  TAATTGGGCCGCCCCACCGAGATACCTGATTGGAGTGTTAAACTTAAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGGGCCGCCCCACCGAGATACCTGATTGGAGTGTTAAACTTAAGGC  100

seq1  CTCAGCATTAAGCAGTAGCAAATGGTGTATATAGGTAGAGCAGAGTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCATTAAGCAGTAGCAAATGGTGTATATAGGTAGAGCAGAGTTACA  150

seq1  ACGGCCCAAACTGCAGATGTTCAACTCAGGTGTGGATGATCAAGCATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCCCAAACTGCAGATGTTCAACTCAGGTGTGGATGATCAAGCATCAA  200

seq1  TGGAAGAAACTAAGGTTTTGAAGGAGGAAATGAAAGCTTTTCCCCAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAAACTAAGGTTTTGAAGGAGGAAATGAAAGCTTTTCCCCAGTGG  250

seq1  TCTGCAGCTGAGTACCAGTGGCTTTTCTATTTGCTTTCTCTTGTTTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGCTGAGTACCAGTGGCTTTTCTATTTGCTTTCTCTTGTTTTCTA  300

seq1  TTTTGTAAACTTTTCCAATGAGCACACAATATGTAGTTTTGATTAAGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAAACTTTTCCAATGAGCACACAATATGTAGTTTTGATTAAGTAT  350

seq1  AAAAATGATTTGAGGGTTTATCTGCACGGAGCACCTGCCAGAAGGGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGATTTGAGGGTTTATCTGCACGGAGCACCTGCCAGAAGGGACAC  400

seq1  CGTTGTTTGTTCTGTGACAAATACCTGGCACCCTCTAAGTTAAAAGGCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTTTGTTCTGTGACAAATACCTGGCACCCTCTAAGTTAAAAGGCGA  450

seq1  ATGCTGCCCAATAACCACTCACCTGCAAGAACTAACAGGCCGGTTGGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCCCAATAACCACTCACCTGCAAGAACTAACAGGCCGGTTGGCAA  500

seq1  AAAGCAGAAGACAAATGGAAACGATGCCAAAGTCAACATTTCCTCAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAAGACAAATGGAAACGATGCCAAAGTCAACATTTCCTCAAGGG  550

seq1  TGGAATCGATAAAACCTGCGGAGTAGCCAACACTCTC-TGTGACCACAGC  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGGAATCGATAAAACCTGCGGAGTAGCCAACACTCTCTTGTGACCACAGC  600

seq1  CGCACCGCTTGCAGCGGCCAGGTCGCTCGGAAGTGTTGATGATGCTGCGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACCGCTTGCAGCGGCCAGGTCGCTCGGAAGTGTTGATGATGCTGCGG  650

seq1  TCCGTGGGTCGT-GGGTCGCGGGTCGCCGGGCAGGGCGAGGGACGAGGCG  698
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  TCCGTGGGTCGTGGGGTCGCGGGTCGCCGGGCAGGGCAAGGGACGAGGCG  700

seq1  GGCGCGGTTCCCTGGAGCAATAGTTGCGCCGCCCTCACGCCGAACGTCCG  748
      || |||| ||||||||||| || |||||||||||||||||||||| ||||
seq2  GGTGCGG-TCCCTGGAGCATTA-TTGCGCCGCCCTCACGCCGAAC-TCCG  747

seq1  GATCCTCACAGGCTGCATCCGAGCGG-CCCGTCCCGCCTCTGCTGGGAGA  797
      |||||||||||| ||||||||| ||| |||||||||||||||||||||||
seq2  GATCCTCACAGGTTGCATCCGATCGGCCCCGTCCCGCCTCTGCTGGGAGA  797

seq1  GACCAA  803
      ||||||
seq2  GACCAA  803

seq1: chr19_57090826_57091399
seq2: B6Ng01-014M02.g_66_639 (reverse)

seq1  GTTGGCACCCCACTTTACAGCAGACTTTACATGCCTTTAATCTGAGATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCACCCCACTTTACAGCAGACTTTACATGCCTTTAATCTGAGATTG  50

seq1  CTAAAAGACAGCTAGTATGAAGACCTGTGTAGTGACCCAGCAGGAGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGACAGCTAGTATGAAGACCTGTGTAGTGACCCAGCAGGAGCTAA  100

seq1  CCCCTCTGGCTGGGTGGTTTGAATAGGAATGGCTCCCGTAGACTCAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTGGCTGGGTGGTTTGAATAGGAATGGCTCCCGTAGACTCAGGTG  150

seq1  TTTGAATACTCTGTCATTGGGGACACTACATGAGAGGGGTTGGGTGTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATACTCTGTCATTGGGGACACTACATGAGAGGGGTTGGGTGTGGC  200

seq1  CTTGCTGTAGTAGTAGAAGAGGTGTGTAACTGCTTGGGTAGTTGGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGTAGTAGTAGAAGAGGTGTGTAACTGCTTGGGTAGTTGGAGGAA  250

seq1  GTGTATAACTGGTGTAACTTTGAGGTTTCAGAAGCTCGGTCCAGGGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAACTGGTGTAACTTTGAGGTTTCAGAAGCTCGGTCCAGGGCCAG  300

seq1  TGTCTCTGTCTTCCTGCCGCCTGCTGATCTGGATGTAGAACTCCCAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTCTTCCTGCCGCCTGCTGATCTGGATGTAGAACTCCCAGCAC  350

seq1  CTTCTCCAGCACCATGTCTGCCTGGGTGCCACCATGCTCCCTGCCTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAGCACCATGTCTGCCTGGGTGCCACCATGCTCCCTGCCTTGCC  400

seq1  AATGAAGATGACAAGGCAAGCTCCAATTAAATGCTTGCTTTTACAAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGATGACAAGGCAAGCTCCAATTAAATGCTTGCTTTTACAAGAGT  450

seq1  TGCCGTGGTCATGGAGTCTCTTCACAGCAATAGAACACAGACTAAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGTGGTCATGGAGTCTCTTCACAGCAATAGAACACAGACTAAGACAG  500

seq1  CTTATTTGGTGAGTGACACCCTAACAACACACATCTTACTAGCCGGGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTGGTGAGTGACACCCTAACAACACACATCTTACTAGCCGGGATC  550

seq1  CTGGGTAGTGCAGTGCATGAATTC  574
      ||||||||||||||||||||||||
seq2  CTGGGTAGTGCAGTGCATGAATTC  574