MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-014P21
Chromosome	19 (Build37)
Map Location	27,883,324 - 27,883,974
singlet/doublet	singlet
Overlap gene	Rfx3
Upstream gene	Gm815, LOC100042576, Vldlr, LOC100042588, Kcnv2, D19Bwg1357e, LOC667868, LOC100042612
Downstream gene	LOC666997, LOC433235, Glis3, EG434460, EG627788
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gm815 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329047 MGI:2685661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042576 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Vldlr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22359 MGI:98935
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042588 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Kcnv2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240595 MGI:2670981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D19Bwg1357e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52874 MGI:106253
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667868 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC100042612 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Rfx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19726 MGI:106582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666997 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins pseudo : _no_value

name	LOC433235 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433235
definition	note : peptidylprolyl isomerase A pseudogene chr19_428.1 pseudo : _no_value

name	Glis3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226075 MGI:2444289
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434460 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434460 MGI:3643316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 497 ESTs, 7 Proteins

name	EG627788 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627788 MGI:3646480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 343 ESTs, 10 Proteins

name	Gm815 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802721 GeneID:329047 MGI:2685661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 815, (NCBI) transcript_id : NM_001033407.2

name	LOC100042576 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270472 GeneID:100042576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042576 transcript_id : XM_001478573.1

name	Vldlr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305628 GeneID:22359 MGI:98935
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : very low density lipoprotein receptor transcript_id : NM_013703.1

name	LOC100042588 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270474 GeneID:100042588
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100042588 transcript_id : XM_001478609.1

name	Kcnv2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34147231 GeneID:240595 MGI:2670981
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel, subfamily V, member 2 transcript_id : NM_183179.1

name	D19Bwg1357e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377658 GeneID:52874 MGI:106253
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed transcript_id : NM_177474.4

name	LOC100042612 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270476 GeneID:100042612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042612 transcript_id : XM_001478637.1

name	Rfx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328188 GeneID:19726 MGI:106582
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X, 3 (influences HLA class II expression) transcript_id : NM_011265.2

name	Glis3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344155 GeneID:226075 MGI:2444289
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GLIS family zinc finger 3 transcript_id : NM_175459.5

name	EG434460 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270414 GeneID:434460 MGI:3643316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 497 ESTs, 7 Proteins product : predicted gene, EG434460 transcript_id : XM_001477346.1

name	EG627788 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270481 GeneID:627788 MGI:3646480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 343 ESTs, 10 Proteins product : predicted gene, EG627788 transcript_id : XM_892488.3

name	Gm815 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701913 GeneID:329047 MGI:2685661
definition	codon_start : 1 product : hypothetical protein LOC329047 protein_id : NP_001028579.1

name	LOC100042576 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270473 GeneID:100042576
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478623.1

name	Vldlr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305629 CCDS:CCDS29721.1 GeneID:22359 MGI:98935
definition	GO_component : GO:0005905 - coated pit [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0006897 - endocytosis [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0045860 - positive regulation of protein kinase activity [Evidence IGI]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : very low density lipoprotein receptor protein_id : NP_038731.1

name	LOC100042588 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270475 GeneID:100042588
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478659.1

name	Kcnv2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147232 CCDS:CCDS29722.1 GeneID:240595 MGI:2670981
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium channel, subfamily V, member 2 protein_id : NP_899002.1

name	D19Bwg1357e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29126213 CCDS:CCDS29723.1 GeneID:52874 MGI:106253
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : D19Bwg1357e protein protein_id : NP_803425.1

name	LOC100042612 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270477 GeneID:100042612
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478687.1

name	Rfx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328189 CCDS:CCDS29725.1 GeneID:19726 MGI:106582
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence ISS] GO_process : GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : regulatory factor X, 3 (influences HLA class II expression) protein_id : NP_035395.2

name	Glis3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113866026 GeneID:226075 MGI:2444289
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0044428 - nuclear part [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003704 - specific RNA polymerase II transcription factor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Kruppel-like zinc finger protein Glis3 product : GLIS family zinc finger 3 protein_id : NP_780668.3

name	EG434460 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270415 GeneID:434460 MGI:3643316
definition	codon_start : 1 product : similar to Rps15a protein protein_id : XP_001477396.1

name	EG627788 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998589 GeneID:627788 MGI:3646480
definition	codon_start : 1 product : similar to cytoplasmic dynein light chain 1 protein_id : XP_897581.1

name	LOC667868 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667868
definition	number : 1 pseudo : _no_value

name	LOC666997 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270478 GeneID:666997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins product : similar to ribosomal protein L29 pseudo : _no_value transcript_id : XR_033825.1

clone name	MSMg01-389M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115B03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-349F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-293D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519E21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-050O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214H20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-391M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079G06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-014P21.b	B6Ng01-014P21.g
ACC	DH849381	DH849382
length	1,007	659
definition	DH849381\|Mus musculus domesticus DNA, BAC clone: B6Ng01-014P21, 5' end.	DH849382\|Mus musculus domesticus DNA, BAC clone: B6Ng01-014P21, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttcatacctttaaggaaaaactaaagccaatgcttctcacagt attccattaaagagaaaaggaaacactgcctctgaacctttgttttaaaa gctaacatcatgctaattcctaaattagataaagattctacaacaacaac aacaaaaagaaaattacagaccaatttccctgagaaacatagatgcaaaa attctcagtgaaatacttttgaacctaaattcaagtacacattatcatcc cagagatgcaggaatggctcaacatacataaatcaataaatcacatgatc atctcattagatgcagaaaaggtctttgacaaagcacaacatccctttgt gataaaaggcaatgtacgggaggtacgtacgtgtccaacatcgtcctaag tagagacaaaaaccagaagcatttctcctaatattagaaataaaacaaga ctttctccattattgttaattacatcacttgaagtcttagctagagcaaa aagacaagaggtgaccataagggatgcaaaggggaaaggaagaagtcaga acatgcttatttgcaaacgatatgattctatacataaaaacccaaagatt ccaccagaaaaatatataaagtaaatacataaagtagcagaatacagaac taacatgcaaagatcattaaccttcctgtataacaatagctgaaccaaga gagacagacaggttgatcagtggaagagaattgaagacccagaaataaaa ccacacacttacggacactcgatctttgacaaagaagccaaaaatataca atggaaaaaagaaagcatcttcaataaatggtgctggtctaactggcagt cagtatgtagaaaaatggaagtagatccatatttatcatcttgcacaaag ctcaagtccaagtggatcaaagacctcacataaaccagatacactgatct aatagagagaagtgggaagagccttgaactcattggcacaggtggggtga gggggtg	gaattcttgtaatatgtttattaaggtatttttaaagacatctcatggaa catgcctaagctgcagttgtaagaatttccttctggaggttttgattttt ccatgtgtttactttgttttcagagcaggccttgttttgtgttttgtgtt ttggttttttggggtgttttttttttctttttaatcttactgaaggtttt atatttagattacttcgttttcactatgtgacaatgtatagcatttcctg ctagttctcagaacatgtctcccgcacccatgcttaatgtctgagttagc ctgagcgtgttctctagcatattcttcaaggcccgagcatcacgcgtgac acatacactagaattatgatgttacattttactttttcctaaaaactcag atgggccctaggttatccccattttctctgccttctgggcacttttcata aatcctgatgggattcttcttagttctcagttattgatgggatcaaaccc attttactgactcacactgctttacacttcggccttttaacattcagcat aatcacagaattaaatttttctttgactccatgtttgttgttatctgaaa ggttctatttacaaagtggtttcagtggcagaatgaaaatttaagtgtgc tcaatcaaa
quality values	Open. Hide. 57 41 17 27 61 61 61 61 61 35 25 61 61 61 61 61 61 61 61 61 61 61 61 55 55 13 12 25 15 8 11 11 15 16 12 15 52 55 55 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 40 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 44 55 59 59 34 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 57 53 57 57 57 57 57 57 53 57 57 57 57 57 53 57 57 53 57 57 53 57 57 57 57 57 57 53 57 53 53 57 57 57 52 57 53 57 47 18 25 47 57 53 57 52 57 57 53 30 57 53 53 53 57 53 57 57 57 57 57 53 52 57 57 57 53 57 57 50 52 52 42 53 57 52 53 52 57 57 57 57 41 53 53 57 57 52 52 45 57 46 53 53 53 45 45 53 57 52 32 52 53 53 42 53 52 52 33 57 37 57 57 46 53 52 38 38 24 38 41 53 52 28 57 37 53 33 50 57 37 53 57 57 57 57 38 52 50 50 52 50 37 57 38 46 40 37 57 33 53 40 53 36 53 47 57 57 53 42 53 40 53 37 30 57 28 45 30 40 29 40 53 40 37 47 38 34 41 33 40 53 40 28 57 40 40 35 30 33 37 37 33 29 41 44 28 31 37 27 35 35 53 34 40 41 29 53 40 33 47 47 41 31 32 43 39 43 32 31 31 27 48 41 51 24 45 30 30 25 30 41 38 27 32 44 46 29 38 32 29 29 30 29 29 24 47 34 26 27 25 46 17 41 29 28 29 29 26 30 21 30 13 47 38 24 21 47 51 29 29 29 51 48 29 28 31 27 38 28 29 29 36 31 38 25 16 8 10 34 28 17 29 38 32 23 29 35 28 29 51 43 35 33 25 18 39 32 25 36 36 18 26 36 18 39 43 51 29 28 28 29 29 27 15 13 23 33 26 10 46 51 46 46 25 11 29 51 33 15 23 29 34 31 28 7 11 25 26 28 20 51 21 18 29 41 15 29 28 29 21 30 10 28 27 32 14 23 28 46 29 23 29 28 18 30 31 34 28 28 30 35 25 12 12 22 51 51 51 29 28 28 31 22 30 24 34 34 19 24 25 18 39 18 20 21 25 51 33 20 25 23 21 25 25 9 28 19 10 16 16 18 38 20 27 21 26 27 20 21 25 28 20 17 14 29 20 23 34 28 10 21 28 23 51 25 19 30 19 21 19 10 24 6 12 28 28 51 36 7 15 11 18 31 16 19 17 12 23 26 15 39 14 24 29 28 17 29 16 20 31 8 25 9 33 29 6 19 34 39 26 18 29 15 32 14 16 17 15 19 18 17 21 16 34 25 16 31 20 17 22 12 9 12 5 21 24 9 27 42 42 29 11 14 21 10 34 30 23 8 7 5	Open. Hide. 50 47 32 38 55 17 11 11 27 19 13 11 28 25 47 47 55 61 55 61 61 55 55 52 59 61 59 59 59 61 61 59 59 59 59 59 45 59 59 52 59 59 59 59 43 59 59 59 59 52 41 39 43 43 37 36 52 49 59 36 59 59 59 59 52 49 59 59 59 59 59 59 41 61 59 59 55 61 61 59 61 61 61 59 61 59 61 59 61 59 59 59 59 59 59 59 59 61 61 61 61 59 59 59 59 59 59 59 59 61 61 61 61 61 59 59 59 59 59 59 59 49 36 61 45 59 59 37 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 55 59 61 61 61 61 61 61 61 61 59 61 59 52 59 59 50 52 49 59 59 59 59 52 39 59 59 59 61 59 59 59 59 59 59 52 59 45 59 61 59 61 61 59 59 59 41 52 59 59 59 59 52 59 59 61 61 61 61 59 59 59 52 52 44 59 59 52 59 52 28 41 59 59 59 52 52 49 43 59 49 52 52 37 52 59 59 59 59 40 35 61 59 49 49 59 59 52 52 59 61 61 59 59 59 59 49 49 45 36 49 52 44 35 41 59 49 52 59 49 45 52 59 61 43 59 52 52 39 49 59 59 59 59 49 59 52 59 59 52 59 59 59 59 59 59 39 41 45 49 43 52 49 61 59 59 52 43 45 49 59 45 52 59 33 43 38 43 39 49 43 43 49 36 43 37 43 33 40 41 30 36 32 52 43 59 52 59 52 49 27 59 43 52 49 52 49 52 55 52 52 55 41 36 41 43 49 49 55 52 55 52 55 55 55 55 55 55 55 24 20 11 11 16 21 49 41 49 41 25 55 52 55 61 55 52 55 55 52 55 37 55 49 49 55 61 61 55 55 55 47 55 61 61 55 61 55 61 55 34 26 37 23 31 32 35 37 43 33 37 38 55 47 50 49 31 55 43 55 55 55 55 61 55 55 43 55 50 49 55 55 50 55 50 50 55 43 39 53 43 53 50 31 43 43 43 35 37 50 35 50 43 28 19 20 24 35 24 43 43 35 27 21 50 50 53 47 50 50 50 37 43 43 43 39 50 52 32 50 50 42 61 61 39 50 40 50 52 52 45 39 42 10 24 50 42 39 24 31 31 20 23 27 35 26 37 30 40 50 31 47 16 25 40 39 39 20 32 29 42 50 38 45 34 30 42 30 22 47 39 30 19 8 47 40 24 34 45 34 31 28 16 52 36 33 52 38 57 36 15 9 39 31 18 7 21 21 9 16 23 12 11 12 25 21 9 15 33 23 8 8 13 12 15 24 45 20 11 42 17 20 39 19 21 33 28 34 40 26 13 47 23 26 28 15 18 20 17 21 22 14 34 22 14 19 26 38 38 14 23 9 10 20 18 13 26 21 6 24 17 20 16 8 14 29 30 32 12 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr19_27883324_27883974
seq2: B6Ng01-014P21.g_68_726 (reverse)

seq1  TTTGA-TGAGCACACTTAA--TTTCATTCTGCCACTGAAACCACTTTGT-  46
      ||||| |||||||||||||  |||||||||||||||||||||||||||| 
seq2  TTTGATTGAGCACACTTAAATTTTCATTCTGCCACTGAAACCACTTTGTA  50

seq1  AATAGAACC-TTCAGATAACAACAAACATGGAGTCAAAG-AAAATTTAAT  94
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  AATAGAACCTTTCAGATAACAACAAACATGGAGTCAAAGAAAAATTTAAT  100

seq1  TCTGTGATTATGCTGAATGTTAAAAGGCCGAAGTGT-AAGCAGTGTGAGT  143
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCTGTGATTATGCTGAATGTTAAAAGGCCGAAGTGTAAAGCAGTGTGAGT  150

seq1  CAGTAAAATGGGTTTGATCCCATCAATAACTGAGAACTAAGAAGAATCCC  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAATGGGTTTGATCCCATCAATAACTGAGAACTAAGAAGAATCCC  200

seq1  ATCAGGATTTATG-AAAGTGCCCAGAAGGCAGAGAAAATGGGGATAACCT  242
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATCAGGATTTATGAAAAGTGCCCAGAAGGCAGAGAAAATGGGGATAACCT  250

seq1  AGGGCCCATCTGAGTTTTTAGGAAAAAGTAAAATGTAACATCATAATTCT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCATCTGAGTTTTTAGGAAAAAGTAAAATGTAACATCATAATTCT  300

seq1  AGTGTATGTGTCACGCGTGATGCTCGGGCCTTGAAGAATATGCTAGAGAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATGTGTCACGCGTGATGCTCGGGCCTTGAAGAATATGCTAGAGAA  350

seq1  CACGCTCAGGCTAACTCAGACATTAAGCATGGGTGCGGGAGACATGTTCT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTCAGGCTAACTCAGACATTAAGCATGGGTGCGGGAGACATGTTCT  400

seq1  GAGAACTAGCAGGAAATGCTATACATTGTCACATAGTGAAAACGAAGTAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTAGCAGGAAATGCTATACATTGTCACATAGTGAAAACGAAGTAA  450

seq1  TCTAAATATAAAACCTTCAGTAAGATTAAAAAGAAAAAAAAAACACCCCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATATAAAACCTTCAGTAAGATTAAAAAGAAAAAAAAAACACCCCA  500

seq1  AAAAACCAAAACACAAAACACAAAACAAGGCCTGCTCTGAAAACAAAGTA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAAAACACAAAACACAAAACAAGGCCTGCTCTGAAAACAAAGTA  550

seq1  AACACATGGAAAAATCAAAACCTCCAGAAGGAAATTCTTACAACTGCAGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATGGAAAAATCAAAACCTCCAGAAGGAAATTCTTACAACTGCAGC  600

seq1  TTAGGCATGTTCCATGAGATGTCTTTAAAAATACCTTAATAAACATATTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCATGTTCCATGAGATGTCTTTAAAAATACCTTAATAAACATATTA  650

seq1  CAAGAATTC  651
      |||||||||
seq2  CAAGAATTC  659

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information