BAC Information

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BAC

Clone NameB6Ng01-018B02
Chromosome19 (Build37)
Map Location 47,614,077 - 47,748,948
singlet/doubletdoublet
Overlap geneSlk, Col17a1
Upstream geneArl3, Sfxn2, D19Wsu162e, Cyp17a1, EG629359, 2010012O05Rik, As3mt, Cnnm2, Nt5c2, Ina, Pcgf6, LOC100042842, Taf5, Usmg5, Pdcd11, 2810048G17Rik, EG546729, EG240669, EG629389, Neurl, EG329070, Sh3pxd2a, Obfc1
Downstream gene6330577E15Rik, D19Ertd652e, LOC677174, Gsto1, Gsto2, BC063749, Gm969, LOC670576, Sorcs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018B02.bB6Ng01-018B02.g
ACCDH851570DH851571
length311655
definitionDH851570|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B02, 5' end.DH851571|Mus musculus domesticus DNA, BAC clone: B6Ng01-018B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,614,077 - 47,614,387)(47,748,294 - 47,748,948)
sequence
aaactgggtttaaaaaaaaaaaaaagccgggcgtggtggtgcacgccttt
aatcccagcactctggaggtagaggcaggcggatttctgagttcgaggcc
agcctggtctacagagtgagttccaagacagccagggctatacggagaaa
ccctgtctcgaaaaaacaaacaatcaaacaaacaaacaacaacaacaaaa
aggaggagctgacctttcctttatcgatgaagcaaatttccaaagctcct
gtcaagccgtatcctggatacagggaaggagggagacaagatgtgagggg
ggtgagatggg
gaattcctgggctatgtcaagcagttaagtggacaaccacaagccaggga
gtcgcaactggggcaaggatttagcagggtgtggtgatgcccgcttttaa
tcccagaaccccagaggagaggcaggtaaatacttgagttcaagactgca
ctgatgtgcacagtgagttccagggctgtatagagctctgctgtctcaag
agggagtcttcaaataaacctctttaaataaaactcagtggttgttttta
cagtgagccacctgggccattgaccctgtgcagacctggggttaggacag
gggaagggactcggtggcattcagcacctacattgaacttagctactcct
tagttggagtagaaaatacgtaacctgccggaaacaataagagaatcctg
taaagcaacaggggttaagtgagtttgtaaagagtaaggtctaagaggac
ttcctggtggaagtaggcttgagaactaggaaaagaaacaggaaactaag
ccccaccctgctgaagagagctggtttcatgtttcctctggactgatcag
acggcccctgagccaccttctcaggctggccagctcattggtactatctc
gaagcgtatggtatgaagaagatatgctgtctcaaaagtgggtgggggtg
ggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_47614077_47614387
seq2: B6Ng01-018B02.b_47_357

seq1  AAACTGGGTTTAAAAAAAAAAAAAAGCCGGGCGTGGTGGTGCACGCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGTTTAAAAAAAAAAAAAAGCCGGGCGTGGTGGTGCACGCCTTT  50

seq1  AATCCCAGCACTCTGGAGGTAGAGGCAGGCGGATTTCTGAGTTCGAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGCACTCTGGAGGTAGAGGCAGGCGGATTTCTGAGTTCGAGGCC  100

seq1  AGCCTGGTCTACAGAGTGAGTTCCAAGACAGCCAGGGCTATACGGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTACAGAGTGAGTTCCAAGACAGCCAGGGCTATACGGAGAAA  150

seq1  CCCTGTCTCGAAAAAACAAACAATCAAACAAACAAACAACAACAACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCGAAAAAACAAACAATCAAACAAACAAACAACAACAACAAAA  200

seq1  AGGAGGAGCTGACCTTTCCTTTATCGATGAAGCAAATTTCCAAAGCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGCTGACCTTTCCTTTATCGATGAAGCAAATTTCCAAAGCTCCT  250

seq1  GTCAAGCCGTATCCTGGATACAGGGAAGGAGGGAGACAAGATGTGAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGCCGTATCCTGGATACAGGGAAGGAGGGAGACAAGATGTGAGGGG  300

seq1  GGTGAGATGGG  311
      |||||||||||
seq2  GGTGAGATGGG  311

seq1: chr19_47748294_47748948
seq2: B6Ng01-018B02.g_68_722 (reverse)

seq1  CCCCCCACCCCCACCCACTTTTGAGACAGCATATCTTCTTCATACCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCCCACCCACTTTTGAGACAGCATATCTTCTTCATACCATAC  50

seq1  GCTTCGAGATAGTACCAATGAGCTGGCCAGCCTGAGAAGGTGGCTCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGAGATAGTACCAATGAGCTGGCCAGCCTGAGAAGGTGGCTCAGGG  100

seq1  GCCGTCTGATCAGTCCAGAGGAAACATGAAACCAGCTCTCTTCAGCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCTGATCAGTCCAGAGGAAACATGAAACCAGCTCTCTTCAGCAGGG  150

seq1  TGGGGCTTAGTTTCCTGTTTCTTTTCCTAGTTCTCAAGCCTACTTCCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTTAGTTTCCTGTTTCTTTTCCTAGTTCTCAAGCCTACTTCCACC  200

seq1  AGGAAGTCCTCTTAGACCTTACTCTTTACAAACTCACTTAACCCCTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTCCTCTTAGACCTTACTCTTTACAAACTCACTTAACCCCTGTTG  250

seq1  CTTTACAGGATTCTCTTATTGTTTCCGGCAGGTTACGTATTTTCTACTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAGGATTCTCTTATTGTTTCCGGCAGGTTACGTATTTTCTACTCC  300

seq1  AACTAAGGAGTAGCTAAGTTCAATGTAGGTGCTGAATGCCACCGAGTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGAGTAGCTAAGTTCAATGTAGGTGCTGAATGCCACCGAGTCCC  350

seq1  TTCCCCTGTCCTAACCCCAGGTCTGCACAGGGTCAATGGCCCAGGTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGTCCTAACCCCAGGTCTGCACAGGGTCAATGGCCCAGGTGGCT  400

seq1  CACTGTAAAAACAACCACTGAGTTTTATTTAAAGAGGTTTATTTGAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAAAAACAACCACTGAGTTTTATTTAAAGAGGTTTATTTGAAGAC  450

seq1  TCCCTCTTGAGACAGCAGAGCTCTATACAGCCCTGGAACTCACTGTGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTGAGACAGCAGAGCTCTATACAGCCCTGGAACTCACTGTGCAC  500

seq1  ATCAGTGCAGTCTTGAACTCAAGTATTTACCTGCCTCTCCTCTGGGGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGCAGTCTTGAACTCAAGTATTTACCTGCCTCTCCTCTGGGGTTC  550

seq1  TGGGATTAAAAGCGGGCATCACCACACCCTGCTAAATCCTTGCCCCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTAAAAGCGGGCATCACCACACCCTGCTAAATCCTTGCCCCAGTT  600

seq1  GCGACTCCCTGGCTTGTGGTTGTCCACTTAACTGCTTGACATAGCCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACTCCCTGGCTTGTGGTTGTCCACTTAACTGCTTGACATAGCCCAGG  650

seq1  AATTC  655
      |||||
seq2  AATTC  655