BAC Information

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BAC

Clone NameB6Ng01-024E06
Chromosome19 (Build37)
Map Location 14,951,303 - 15,038,056
singlet/doubletdoublet
Overlap geneEG433225
Upstream geneOlfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
Downstream geneEG635497, Pomc-ps1, LOC667482, Psat1, LOC100041424, Cep78
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024E06.bB6Ng01-024E06.g
ACCDH855957DH855958
length932884
definitionDH855957|Mus musculus domesticus DNA, BAC clone: B6Ng01-024E06, 5' end.DH855958|Mus musculus domesticus DNA, BAC clone: B6Ng01-024E06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,037,121 - 15,038,056)(14,951,303 - 14,952,180)
sequence
gaattcatcagtcagtggcttgatgataaataactgctagattgcttgtg
ttccactagtgatgctacccacagcatgtaaaatacactagaggtagaaa
gtaaggattacgcggatcactgcttatatcatactggggttccccctggg
tgttgggtgtagaagctcagaaaagctgagatcaatcatgccatctcaga
aagctgacgtgactacactcccaccttctccaggataaaggatgaccttg
gctttgaatggactcatcacccctcttcactggttcttggcataacgctg
ttcaggaaggctggaggaacggagaagataatcatgacagtgcaaacagt
gattttcaaaaaaccatatctttctatttatttttgataatttcagactt
tcatatatgtatacaatatatttcaatcatagaaacctctacgcccccag
cctgcaccacaacttcttccagattttgtacaaatataaccatgcctcct
tcccaatgagtagtgaattttgagcattccagatatagttgggatttgga
ctgttcattaacggcacaggtctaaaagcctcagtctttcttgagtgtcc
tggcattaggaaagtgcccttgaaagtaacacaaagcagatgataaccag
ccatgaactgaaatctcaaaattgtagctcaagtcaaccttttctcttca
tacattggcttcaccaggcatctgtatggcaatgaagagctgccaaaaaa
caaatctcaattttattttcacttttattctcttaattttctacctggta
ttcctctgaaatgtatctctgtatcattccgaccaatcctagattaatta
tagatatgcattatcaaaggcctttggacacggcctgtgaggagtgaata
aggtctaagtgatgtgtaatgatgacacaggt
gaattccatctggtcgatatctaacattcagagcttaaatggaaggccct
atagagtttctagatttggagatggagggatctcactgtgttttataaag
tcattgaaagagatgtgtgtggttcaagcctgctgcatctgcaaaaagtc
agaaacctatacacttcatccagaaaattattttaagtgtggaaacaatg
cctgatgagtcttgattctgtgcccaccaacatcttaatatgagtgagac
tcggggtctcctttgtagagctatctatccccttctgtattgtcaaagaa
caattcctactcaataattttgggtctggttctcattttcttacagctta
atatagtcctgggttctactgaagttaatatttaaatattcttctcttaa
acgcattagcatggctgtcagaaaatgagaccatgagaaaactcactgag
acttaaaagaatgcaatgtcatttactatcttaatatgaacagaatatta
ctagtagaagtctaggaccttctaggctattacatatcgaccttggttag
tacccgaaatacactcaagaagctggcaagcatcaatgcttgaatcctat
ttgataaaatctgattcaattaatctagggtaaagcataagtgtgaaaaa
tttaaaagctttcctgttgattcttgtgtgttccaggcttatttataata
atcctcatgcctgcatattctttaactaatgtaacttttactcccttgtt
ttctgattttctgtttatttatttaatatgaatttattgattcattttgt
cctttcatttagcccttcttgtttccaaatattttgcaataaaacttaca
gtgaacaaagaaaacccttgagcaatttcatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15037121_15038056
seq2: B6Ng01-024E06.b_35_966 (reverse)

seq1  ACCTGTGTCATCATTACACATCACTTAGAACTTCATTCACTCCTCACAGG  50
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  ACCTGTGTCATCATTACACATCACTTAGACCTT-ATTCACTCCTCACAGG  49

seq1  CCGTGTCCAAAGGCCTTTTGATAATGCATATCTATAATTTAATCTAGGAT  100
      ||||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  CCGTGTCCAAAGGCC-TTTGATAATGCATATCTATAA-TTAATCTAGGAT  97

seq1  TGGTCGGAATGATACAGAGATAACATTTCAGAGGAATACCAGGTAGAAAA  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGGTCGGAATGATACAGAGAT-ACATTTCAGAGGAATACCAGGTAGAAAA  146

seq1  TTAAGAGAATAAAAGTGAAAATAAAATTGAGATTTGTTTTTTGGCAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGAATAAAAGTGAAAATAAAATTGAGATTTGTTTTTTGGCAGCTC  196

seq1  TTCATTGCCATACAGATGCCTGGTGAAGCCAATGTATGAAGAGAAAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGCCATACAGATGCCTGGTGAAGCCAATGTATGAAGAGAAAAGGT  246

seq1  TGACTTGAGCTACAATTTTGAGATTTCAGTTCATGGCTGGTTATCATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGAGCTACAATTTTGAGATTTCAGTTCATGGCTGGTTATCATCTG  296

seq1  CTTTGTGTTACTTTCAAGGGCACTTTCCTAATGCCAGGACACTCAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTTACTTTCAAGGGCACTTTCCTAATGCCAGGACACTCAAGAAA  346

seq1  GACTGAGGCTTTTAGACCTGTGCCGTTAATGAACAGTCCAAATCCCAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGCTTTTAGACCTGTGCCGTTAATGAACAGTCCAAATCCCAACT  396

seq1  ATATCTGGAATGCTCAAAATTCACTACTCATTGGGAAGGAGGCATGGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGGAATGCTCAAAATTCACTACTCATTGGGAAGGAGGCATGGTTA  446

seq1  TATTTGTACAAAATCTGGAAGAAGTTGTGGTGCAGGCTGGGGGCGTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTACAAAATCTGGAAGAAGTTGTGGTGCAGGCTGGGGGCGTAGAG  496

seq1  GTTTCTATGATTGAAATATATTGTATACATATATGAAAGTCTGAAATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATGATTGAAATATATTGTATACATATATGAAAGTCTGAAATTAT  546

seq1  CAAAAATAAATAGAAAGATATGGTTTTTTGAAAATCACTGTTTGCACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAAATAGAAAGATATGGTTTTTTGAAAATCACTGTTTGCACTGT  596

seq1  CATGATTATCTTCTCCGTTCCTCCAGCCTTCCTGAACAGCGTTATGCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTATCTTCTCCGTTCCTCCAGCCTTCCTGAACAGCGTTATGCCAA  646

seq1  GAACCAGTGAAGAGGGGTGATGAGTCCATTCAAAGCCAAGGTCATCCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGTGAAGAGGGGTGATGAGTCCATTCAAAGCCAAGGTCATCCTTT  696

seq1  ATCCTGGAGAAGGTGGGAGTGTAGTCACGTCAGCTTTCTGAGATGGCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGAGAAGGTGGGAGTGTAGTCACGTCAGCTTTCTGAGATGGCATG  746

seq1  ATTGATCTCAGCTTTTCTGAGCTTCTACACCCAACACCCAGGGGGAACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCTCAGCTTTTCTGAGCTTCTACACCCAACACCCAGGGGGAACCC  796

seq1  CAGTATGATATAAGCAGTGATCCGCGTAATCCTTACTTTCTACCTCTAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATGATATAAGCAGTGATCCGCGTAATCCTTACTTTCTACCTCTAGT  846

seq1  GTATTTTACATGCTGTGGGTAGCATCACTAGTGGAACACAAGCAATCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTACATGCTGTGGGTAGCATCACTAGTGGAACACAAGCAATCTAG  896

seq1  CAGTTATTTATCATCAAGCCACTGACTGATGAATTC  936
      ||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTTATCATCAAGCCACTGACTGATGAATTC  932

seq1: chr19_14951303_14952180
seq2: B6Ng01-024E06.g_70_953

seq1  GAATTCCATCTGGTCGATATCTAACATTCAGAGCTTAAATGGAAGGCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGGTCGATATCTAACATTCAGAGCTTAAATGGAAGGCCCT  50

seq1  ATAGAGTTTCTAGATTTGGAGATGGAGGGATCTCACTGTGTTTTATAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTTTCTAGATTTGGAGATGGAGGGATCTCACTGTGTTTTATAAAG  100

seq1  TCATTGAAAGAGATGTGTGTGGTTCAAGCCTGCTGCATCTGCAAAAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAAAGAGATGTGTGTGGTTCAAGCCTGCTGCATCTGCAAAAAGTC  150

seq1  AGAAACCTATACACTTCATCCAGAAAATTATTTTAAGTGTGGAAACAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTATACACTTCATCCAGAAAATTATTTTAAGTGTGGAAACAATG  200

seq1  CCTGATGAGTCTTGATTCTGTGCCCACCAACATCTTAATATGAGTGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGAGTCTTGATTCTGTGCCCACCAACATCTTAATATGAGTGAGAC  250

seq1  TCGGGGTCTCCTTTGTAGAGCTATCTATCCCCTTCTGTATTGTCAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGTCTCCTTTGTAGAGCTATCTATCCCCTTCTGTATTGTCAAAGAA  300

seq1  CAATTCCTACTCAATAATTTTGGGTCTGGTTCTCATTTTCTTACAGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCTACTCAATAATTTTGGGTCTGGTTCTCATTTTCTTACAGCTTA  350

seq1  ATATAGTCCTGGGTTCTACTGAAGTTAATATTTAAATATTCTTCTCTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTCCTGGGTTCTACTGAAGTTAATATTTAAATATTCTTCTCTTAA  400

seq1  ACGCATTAGCATGGCTGTCAGAAAATGAGACCATGAGAAAACTCACTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATTAGCATGGCTGTCAGAAAATGAGACCATGAGAAAACTCACTGAG  450

seq1  ACTTAAAAGAATGCAATGTCATTTACTATCTTAATATGAACAGAATATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAAGAATGCAATGTCATTTACTATCTTAATATGAACAGAATATTA  500

seq1  CTAGTAGAAGTCTAGGACCTTCTAGGCTATTACATATCGACCTTGGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGAAGTCTAGGACCTTCTAGGCTATTACATATCGACCTTGGTTAG  550

seq1  TACCCGAAATACACTCAAGAAGCTGGCAAGCATCAATGCTTGAATCCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGAAATACACTCAAGAAGCTGGCAAGCATCAATGCTTGAATCCTAT  600

seq1  TTGATAAAATCTGATTCAATTAATCTAGGGTAAAGCATAAGTGTGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAAATCTGATTCAATTAATCTAGGGTAAAGCATAAGTGTGAAAAA  650

seq1  TTTAAAAGCTTTCCTGTTGATTCTTGTGTGTTCCAGGCTTATTTATAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGCTTTCCTGTTGATTCTTGTGTGTTCCAGGCTTATTTATAATA  700

seq1  ATCCTCATGCCTGCATATTCTTTAACTAATGTAAC-TTTACTCCCTTGTT  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATCCTCATGCCTGCATATTCTTTAACTAATGTAACTTTTACTCCCTTGTT  750

seq1  TTCTGA-TTTCTGTTTA-TTATTTAATATGAATTTATTGATTCA-TTTGT  796
      |||||| |||||||||| |||||||||||||||||||||||||| |||||
seq2  TTCTGATTTTCTGTTTATTTATTTAATATGAATTTATTGATTCATTTTGT  800

seq1  CCATTCATTTAG-CCTTCTTGTTT-CAAATATTTTGCAATAAAACTTACA  844
      || ||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  CCTTTCATTTAGCCCTTCTTGTTTCCAAATATTTTGCAATAAAACTTACA  850

seq1  GTGAACAAAGAAAACCCTTGAGCAATTTCATTTT  878
      ||||||||||||||||||||||||||||||||||
seq2  GTGAACAAAGAAAACCCTTGAGCAATTTCATTTT  884