BAC Information

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BAC

Clone NameB6Ng01-025E08
Chromosome19 (Build37)
Map Location 11,137,626 - 11,138,669
singlet/doubletsinglet
Overlap genenone
Upstream geneFads2, LOC100040227, Fads1, Fen1, 1810006K21Rik, Gm98, Dagla, Syt7, Gm705, 4930579J09Rik, 0610038F07Rik, 5730453I16Rik, 2810441K11Rik, Tmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010
Downstream geneMs4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025E08.bB6Ng01-025E08.g
ACCDH856669DH856670
length1,1671,094
definitionDH856669|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E08, 5' end.DH856670|Mus musculus domesticus DNA, BAC clone: B6Ng01-025E08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatacatggcccccaa
tgaaagagctagagaaagtaccaaagagctaagggatctgcaaccctata
gtggaacaacattatgactaccagtaccccggagctcttgacttctagct
gcatatgcatcaaaagatgctatcggcatcctggaagaaagtccatggac
acgcaaactttatattgctcagtcaaggaacgccagggccataaagggga
gggggtgggttagggag
gaattctctgtttagatatgcatctcaattttaaattgaattatttggtt
tgttgatgcctagtttcttgagttctttaaatattttggatattagccct
ttgtcagatgtggtgttagtgaaaatcttttgaacttgagttttgtgcag
ggtgatagatatggatctatttgcgttcttctactcgccagcatctattt
agaccagcaccatttgttgaagatgctttcttttttgtaatttttattag
atatttttcttcatttacatttcagaagatgctttctttttcctattgtc
tacttctgtgaaaaatcaggtgttcataggtgtgtgaatttccatctggg
tcttcaatttgatttcattgatcaacctatctgttttcacagtgtggctg
ttgttgctatagccctgtagtagagcttgagaccagggatggtgatacct
ctggaagttcttttattgtacaagattgtacaatttgtatttttttccag
atgaagttgagtattattctttcaaggtctataaagattatgttgaaatt
ctgatagggatttacagccggactttcttagacctgactgcgatataatg
gcatagaggaattttagtatttttatgcttaggcctttttatgggcaatc
tcttgagtactctaacctgactaatcctggcactatgccctatcacgtgg
ccagatctacctctctgttctgctctgatccctctgtttatgtgcgagtc
tcattcttctcccagtgttcctctgtctgcctggaagctctgtcttccac
ttcttacccaactattggccatcagatatttattatagccaaccagatac
attctagattgccttaggcagatgaagaagaatgaatattacaaatatca
gactggtgatgggccatagaaatacaatactaaaacctgccagtatttag
ctttcttgctggtatagattaacaattgaatatacagagacatacttcac
acatgtactccaccagggattacattaattctgaagatggcttttgtagg
atggccattttactatggtatctatatcatgagcatgggtgatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_11137626_11138669
seq2: B6Ng01-025E08.g_132_1161

seq1  TTCTTGAGTTCTTTAAATATTTTGGATATTAGCCCTTTGTCAGATGTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGTTCTTTAAATATTTTGGATATTAGCCCTTTGTCAGATGTGGT  50

seq1  GTTAGTGAAAATCTTTTGAACTTGAGTTTTGTGCAGGGTGATAGATATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGAAAATCTTTTGAACTTGAGTTTTGTGCAGGGTGATAGATATGG  100

seq1  ATCTATTTGCGTTCTTCTACTCGCCAGCATCTATTTAGACCAGCACCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTGCGTTCTTCTACTCGCCAGCATCTATTTAGACCAGCACCATT  150

seq1  TGTTGAAGATGCTTTCTTTTTTGTAATTTTTATTAGATATTTTTCTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAGATGCTTTCTTTTTTGTAATTTTTATTAGATATTTTTCTTCAT  200

seq1  TTACATTTCAGAAGATGCTTTCTTTTTCCTATTGTCTACTTCTGTGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCAGAAGATGCTTTCTTTTTCCTATTGTCTACTTCTGTGAAAA  250

seq1  ATCAGGTGTTCATAGGTGTGTGAATTTCCATCTGGGTCTTCAATTTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTGTTCATAGGTGTGTGAATTTCCATCTGGGTCTTCAATTTGATT  300

seq1  TCATTGATCAACCTATCTGTTTTCACAGTGTGGCTGTTGTTGCTATAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGATCAACCTATCTGTTTTCACAGTGTGGCTGTTGTTGCTATAGCC  350

seq1  CTGTAGTAGAGCTTGAGACCAGGGATGGTGATACCTCTGGAAGTTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTAGAGCTTGAGACCAGGGATGGTGATACCTCTGGAAGTTCTTTT  400

seq1  ATTGTACAAGATTGTACAATTTGTATTTTTTTCCAGATGAAGTTGAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACAAGATTGTACAATTTGTATTTTTTTCCAGATGAAGTTGAGTAT  450

seq1  TATTCTTTCAAGGTCTATAAAGATTATGTTGAAATTCTGATAGGGATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTCAAGGTCTATAAAGATTATGTTGAAATTCTGATAGGGATTTA  500

seq1  CAGCCGGACTTTCTTAGACCTGACTGCGATATAATGGCATAGAGGAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGGACTTTCTTAGACCTGACTGCGATATAATGGCATAGAGGAATTT  550

seq1  TAGTATTTTTATGCTTAGGCCTTTTTATGGGCAATCTCTTGAGTACTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTTTATGCTTAGGCCTTTTTATGGGCAATCTCTTGAGTACTCTA  600

seq1  ACCTGACTAATCCTGGCACTATGCCCTATCACGTGGCCAGATCTACCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACTAATCCTGGCACTATGCCCTATCACGTGGCCAGATCTACCTCT  650

seq1  CTGTTCTGCTCTGATCCCTCTGTTTATGTGCGAGTCTCATTCTTCTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTGCTCTGATCCCTCTGTTTATGTGCGAGTCTCATTCTTCTCCCA  700

seq1  GTGTTCCTCTGTCTGCCTGGAAGCTCTGTCTTCCACTTCTTACCCAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTCTGTCTGCCTGGAAGCTCTGTCTTCCACTTCTTACCCAACTA  750

seq1  TTGGCCATCAGATATTTATTATAGCCAACCAGATACAATTCTAGATTGCC  800
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGGCCATCAGATATTTATTATAGCCAACCAGATAC-ATTCTAGATTGCC  799

seq1  TTAGGCAGATGAAGAAGAATGAATATTTACAAAATATCAGACTGGTGATG  850
      ||||||||||||||||||||||||| |||| |||||||||||||||||||
seq2  TTAGGCAGATGAAGAAGAATGAATA-TTAC-AAATATCAGACTGGTGATG  847

seq1  GGCCATAGAAATAACAATACTAAAAACCTGCCAGTATTTAGCTTTC-TGC  899
      |||||||||||| |||||||| |||||||||||||||||||||||| |||
seq2  GGCCATAGAAAT-ACAATACT-AAAACCTGCCAGTATTTAGCTTTCTTGC  895

seq1  TGGTATAGAATTAACAATTGAATATACAGAGACATACCTTCACACAATGT  949
      |||||||| ||||||||||||||||||||||||||| |||||||| ||||
seq2  TGGTATAG-ATTAACAATTGAATATACAGAGACATA-CTTCACAC-ATGT  942

seq1  ACTCCAACAGGGATTACATTAAATCTGTAGATTGCTTTTTGTAAGATGGC  999
      |||||| ||||||||||||||| |||| |||| || ||||||| ||||||
seq2  ACTCCACCAGGGATTACATTAATTCTGAAGATGGC-TTTTGTAGGATGGC  991

seq1  CATTTTTACTATGGTAATCATATTAATCCATGAGCATGGGTGATC  1044
      || |||||||||||||   ||||     |||||||||||||||||
seq2  CA-TTTTACTATGGTATCTATAT-----CATGAGCATGGGTGATC  1030