BAC Information

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BAC

Clone NameB6Ng01-034J03
Chromosome19 (Build37)
Map Location 56,482,642 - 56,605,015
singlet/doubletdoublet
Overlap geneCasp7, 9930023K05Rik, Dclre1a
Upstream geneVti1a, LOC100043479, Tcf7l2, Ppnr, LOC100043484, Habp2, Nrap
Downstream geneNhlrc2, Adrb1, EG629643, A630007B06Rik, 1700010L13Rik, Tdrd1, Vwa2, Afap1l2, Ablim1, EG668259, AI450540, Trub1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034J03.bB6Ng01-034J03.g
ACCDH863283DH863284
length543875
definitionDH863283|Mus musculus domesticus DNA, BAC clone: B6Ng01-034J03, 5' end.DH863284|Mus musculus domesticus DNA, BAC clone: B6Ng01-034J03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,604,468 - 56,605,015)(56,482,642 - 56,483,516)
sequence
cttttttcccttcttgctctttctgtatgtaaagctggacactgggggtt
tgcttactctagaaagcagaagcccgtttgtccttcttcccgtttcctcg
tacttcctccagactttcctgacgtttgttcacagctgagggaagcatgt
agcccagtggctctcaggattcccagtgcttcagcctttaatgttcacgc
tgtgctgaccccacctaaagttgtctccgctgctacttcagatctataat
gctgctactgtcatgaatcataatgtaaatatctgtgtcactggtgtctt
aggctacaccttggacttatgtgactcccaaaggggtcgagacccacagg
ttgagaactactggtttagagaaagaagtaaattccaactatatacaact
ctctaaaaatgcatatgtctaggtatgcgcattaaaacgtagtgtttttg
ttttctgtgttccctgagttttatgttatgttaacgttttcatctttatt
agtcataaagacaccaaggtttttggggagagggggggtattg
gaattcatcctcagctgagctcctcttcccattattgctccagataaaca
agtcattagattattaccctgttagtcatctggaagattaagtaggaatt
gcagatgatgctgaactcaaaggctttaaaaatggttctgagtaatgaag
aaatacaaggataagaaagccattgtctctttgcttattttccattttta
gccgtggaatcaccgaagagtcatgaatgaattcatgagacggaagaatg
ttgcgatagtaatgccgcttaattcttgaattccttctgtgctctgtact
gagtatggcaactcagtcaggtgcttcctcacattcaaagaactgggagt
cactggcttcttgttcaacctttggggacacacacacaccccaatttcta
ggaaggtcatcaaaagcctgtaccgaaactcctccatcagttggtcccga
ggccgtttaccgtctacttagaggcaaatcctcaaagtatcagaaaaaga
agcacacatacacgtttgcatctattctgtgtaatagatttatgtatgtg
cacatgtgtgctgcataaggcataccaagctgctcacagagtggtttttg
cccgtgcgaatggcggccaaagccagcttgtcaagcagttaccccacaca
ggctctttctcagtagagcgctgaaaccatttttcattcaataaatgtct
tactaggcatcctgtgacggtctccatgctcgaagttctcagttataact
ggataggtggggcagggctagggagggaaggagagcacagagctctcagc
tctggttccctcctgattcagtgcttgatccaccatcctgagaccaggtc
tgccatggggaaagggggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_56604468_56605015
seq2: B6Ng01-034J03.b_45_593 (reverse)

seq1  CAATA-CCCCCCTCTCCCCAAAAACCTTGGTGTCTTTATGACTAATAAAG  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCCCCCCTCTCCCCAAAAACCTTGGTGTCTTTATGACTAATAAAG  50

seq1  ATGAAAACGTTAACATAACATAAAACTCAGGGAACACAGAAAACAAAAAC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACGTTAACATAACATAAAACTCAGGGAACACAGAAAACAAAAAC  100

seq1  ACTACGTTTTAATGCGCATACCTAGACATATGCATTTTTAGAGAGTTGTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACGTTTTAATGCGCATACCTAGACATATGCATTTTTAGAGAGTTGTA  150

seq1  TATAGTTGGAATTTACTTCTTTCTCTAAACCAGTAGTTCTCAACCTGTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTGGAATTTACTTCTTTCTCTAAACCAGTAGTTCTCAACCTGTGG  200

seq1  GTCTCGACCCCTTTGGGAGTCACATAAGTCCAAGGTGTAGCCTAAGACAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCGACCCCTTTGGGAGTCACATAAGTCCAAGGTGTAGCCTAAGACAC  250

seq1  CAGTGACACAGATATTTACATTATGATTCATGACAGTAGCAGCATTATAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACACAGATATTTACATTATGATTCATGACAGTAGCAGCATTATAG  300

seq1  ATCTGAAGTAGCAGCGGAGACAACTTTAGGTGGGGTCAGCACAGCGTGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGTAGCAGCGGAGACAACTTTAGGTGGGGTCAGCACAGCGTGAA  350

seq1  CATTAAAGGCTGAAGCACTGGGAATCCTGAGAGCCACTGGGCTACATGCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAGGCTGAAGCACTGGGAATCCTGAGAGCCACTGGGCTACATGCT  400

seq1  TCCCTCAGCTGTGAACAAACGTCAGGAAAGTCTGGAGGAAGTACGAGGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGCTGTGAACAAACGTCAGGAAAGTCTGGAGGAAGTACGAGGAA  450

seq1  ACGGGAAGAAGGACAAACGGGCTTCTGCTTTCTAGAGTAAGCAAACCCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGAAGAAGGACAAACGGGCTTCTGCTTTCTAGAGTAAGCAAACCCCC  500

seq1  AGTGTCCAGCTTTACATACAGAAAGAGCAAGAAGGGAAAAAAGGAATTC  548
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCAGCTTTACATACAGAAAGAGCAAGAAGGGAAAAAAGGAATTC  549

seq1: chr19_56482642_56483516
seq2: B6Ng01-034J03.g_69_943

seq1  GAATTCATCCTCAGCTGAGCTCCTCTTCCCATTATTGCTCCAGATAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTCAGCTGAGCTCCTCTTCCCATTATTGCTCCAGATAAACA  50

seq1  AGTCATTAGATTATTACCCTGTTAGTCATCTGGAAGATTAAGTAGGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTAGATTATTACCCTGTTAGTCATCTGGAAGATTAAGTAGGAATT  100

seq1  GCAGATGATGCTGAACTCAAAGGCTTTAAAAATGGTTCTGAGTAATGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGATGCTGAACTCAAAGGCTTTAAAAATGGTTCTGAGTAATGAAG  150

seq1  AAATACAAGGATAAGAAAGCCATTGTCTCTTTGCTTATTTTCCATTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAGGATAAGAAAGCCATTGTCTCTTTGCTTATTTTCCATTTTTA  200

seq1  GCCGTGGAATCACCGAAGAGTCATGAATGAATTCATGAGACGGAAGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGGAATCACCGAAGAGTCATGAATGAATTCATGAGACGGAAGAATG  250

seq1  TTGCGATAGTAATGCCGCTTAATTCTTGAATTCCTTCTGTGCTCTGTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGATAGTAATGCCGCTTAATTCTTGAATTCCTTCTGTGCTCTGTACT  300

seq1  GAGTATGGCAACTCAGTCAGGTGCTTCCTCACATTCAAAGAACTGGGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATGGCAACTCAGTCAGGTGCTTCCTCACATTCAAAGAACTGGGAGT  350

seq1  CACTGGCTTCTTGTTCAACCTTTGGGGACACACACACACCCCAATTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCTTCTTGTTCAACCTTTGGGGACACACACACACCCCAATTTCTA  400

seq1  GGAAGGTCATCAAAAGCCTGTACCGAAACTCCTCCATCAGTTGGTCCCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTCATCAAAAGCCTGTACCGAAACTCCTCCATCAGTTGGTCCCGA  450

seq1  GGCCGTTTACCGTCTACTTAGAGGCAAATCCTCAAAGTATCAGAAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGTTTACCGTCTACTTAGAGGCAAATCCTCAAAGTATCAGAAAAAGA  500

seq1  AGCACACATACACGTTTGCATCTATTCTGTGTAATAGATTTATGTATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACATACACGTTTGCATCTATTCTGTGTAATAGATTTATGTATGTG  550

seq1  CACATGTGTGCTGCATAAGGCATACCAAGCTGCTCACAGAGTGGTTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGTGCTGCATAAGGCATACCAAGCTGCTCACAGAGTGGTTTTTG  600

seq1  CCCGTGCGAATGGCGGCCAAAGCCAGCTTGTCAAGCAGTTACCCCACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGCGAATGGCGGCCAAAGCCAGCTTGTCAAGCAGTTACCCCACACA  650

seq1  GGCTCTTTCTCAGTAGAGCGCTGAAACCATTTTTCATTCAATAAATGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTTCTCAGTAGAGCGCTGAAACCATTTTTCATTCAATAAATGTCT  700

seq1  TACTAGGCATCCTGTGACGGTCTCCATGCTCGAAGTTCTCAGTTATAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGCATCCTGTGACGGTCTCCATGCTCGAAGTTCTCAGTTATAACT  750

seq1  GGATAGGTGGGGCAGGGCTAGGGAGGGAAGGAGAGCACAGAGCTCTCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGTGGGGCAGGGCTAGGGAGGGAAGGAGAGCACAGAGCTCTCAGC  800

seq1  TCTGGTTCCCTCCTGATTCAGTGCTTGATCCACCATCCTGAGACCAGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTCCCTCCTGATTCAGTGCTTGATCCACCATCCTGAGACCAGGTC  850

seq1  TGCCATGGGGAAAGGGGGGGTGGGG  875
      |||||||||||||||||||||||||
seq2  TGCCATGGGGAAAGGGGGGGTGGGG  875