BAC Information

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BAC

Clone NameB6Ng01-043G05
Chromosome19 (Build37)
Map Location 18,517,580 - 18,596,294
singlet/doubletdoublet
Overlap genenone
Upstream genePcsk5, Eef1a1-ps1
Downstream geneLOC383440, Ostf1, LOC666712, BC016495, LOC100042193, 2410127L17Rik, LOC100042184, D030056L22Rik, Trpm6, Rorb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043G05.bB6Ng01-043G05.g
ACCDH869468DH869469
length1,0481,144
definitionDH869468|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G05, 5' end.DH869469|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,595,241 - 18,596,294)(18,517,580 - 18,518,723)
sequence
gaattcctttcaagttgaacatatctgtgttttttggtctggaaggcaca
tttggttttgaagaaccagaacaaagatgtgaagaaccatggtacattga
taaagacttattttctcttactagaaaaaaactgtcctgtcaccctatat
cctgtgcttctcaaaatacccccactttattccacagctccggtccttgt
tattttctgtcttgtatttagattctgcctaattggatgatttcacttcc
ccttctgataaaaatctaacgcgcagaattggaaacaagaacggtgattg
tttccttattaattgtgttattgctttttcctaagtcctgtgttaattgg
tggcatctttgcgaagcctgcttcctccctatgtgttagattatagcaac
gtggagtctgggatctcaaatgtgacccatctgtgggagaattaaatcac
agcaggaaatgatttaaatctttgaaaatgagtaattatgtcttgtgaga
ggaaagagaccaagggaaaaacgtagagaaacaatgccttactgaatgct
cttccttaaattgctgagtccctttgtccctaagtgggaggacaagaggc
acccaatgattctttatcgctccactatattcaaatgcaatgcagtccaa
atatagtataatctaacgcatacctttctcagacgcagcaggtatggagt
ctattgtagagatggagagatgacagttctcattagcaaagcttcatttg
cccagagtcaggcaacctagcaaaggctggacttgaacctggtcttttga
cagtcaaaataatgcaactgtgggttattaagaagatgctagactctggt
tgctaattatcttctccttagcttttcttctaatgatgttgccatatgct
gatattgaaaataaataaggattgtgggtgggcatctcaagtccagagat
tctggtgctggatgtgtgctgttgtaatgagtcataactagtgtgtgaac
atcagtgctggggagtttgtggtaatgtctgggctcgaagaggttatg
gaattccagaaaataccaactaaagagtggtgagacagaccatgtatgac
aatggtgacatcgtctcctaggctgggaattctggatggaatagaagaaa
agataacgtcctgagcatgagccttctctctgcttcttcatcgccatatg
gtgaggaagctccctggccacaaaattccactgccaaaatgttttgcaca
gcacatgggactaagcaaccatggactgaacaaactcaaaccataagaaa
aactaaagaatttcaaactgagaaaacaaattcatagccgtccacccagc
atgaaatttatgaacaaaattgactcaatggggaaaatgaaataagatat
tcattccggtgcctcagaacttacaaatataaaaacaaatttacccatgc
caaacaaaacatgtcaccatttctgtgtgcctctacccacttacctcaat
atacactgctgaaatgaattcccttacccagacactgaactttaactgtg
gtagaatatgctaatttttgtcttgatttactttacacctgcagaattaa
agccctttagaattctatataaaaataatattctgctatctataccttcc
acgtcttagcttgcatgtggataaaagaatttgatttctggttgtttttg
tgtttcaaatctaagaccataggggaaaatattttctggcaatgtgtcac
gtgcacaaatgtattacaatttattttacctccaaaatgactagtgagac
ttagttttagccttttttctatgttagctactatctagaaaaaaaaaact
atttccctcactcccattagcctcgggtgcactggtgtaattaaaaatgc
caactgtgtctctatcataattttgtgggaaagtatataatgaaaatatt
atcccagggatactgaaaaatgatatgagttctttttttttaaaatgatg
aataaaatttacagatgaaagaataaaattgagtgtcttgaaatatgaac
tgaagtgaataatttacttttctccttcaacaggaagcttatcgttgctt
ctacttacaaggtttaaaggtgagtactggattttttttctgggtgattt
ctttatggggttattcatttgggattaaatagtgcatcatatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_18595241_18596294
seq2: B6Ng01-043G05.b_45_1092 (reverse)

seq1  CATAAACTCTCTCGAGCCCAGGACATAACACAAAACTCCCCAGCACTGAT  50
      ||||| |||| ||||||||| ||||| ||   ||||||||||||||||||
seq2  CATAACCTCT-TCGAGCCCA-GACATTACCACAAACTCCCCAGCACTGAT  48

seq1  GTTCACACCACTAGTTATGACTCATTTACAACAGCACACATCCAGCACCA  100
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  GTTCACA-CACTAGTTATGACTCA-TTACAACAGCACACATCCAGCACCA  96

seq1  GAATCCTCTGGACTTGAGATGCCCACCCACATTCCTTATTTATTTTCAAT  150
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAT-CTCTGGACTTGAGATGCCCACCCACAATCCTTATTTATTTTCAAT  145

seq1  ATCAGCATATGGGCAACATCATTAGAAGAAAAGCTAAGGAGAAGATAATT  200
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCATAT-GGCAACATCATTAGAAGAAAAGCTAAGGAGAAGATAATT  194

seq1  AGCAACCAGAGTCTAGCATCTTCTTAATAACCCACAGTTGCATTATTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCAGAGTCTAGCATCTTCTTAATAACCCACAGTTGCATTATTTTG  244

seq1  ACTGTCAAAAGACCAGGTTCAAGTCCAGCCTTTGCTAGGTTGCCTGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAAAAGACCAGGTTCAAGTCCAGCCTTTGCTAGGTTGCCTGACTC  294

seq1  TGGGCAAATGAAGCTTTGCTAATGAGAACTGTCATCTCTCCATCTCTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAATGAAGCTTTGCTAATGAGAACTGTCATCTCTCCATCTCTACA  344

seq1  ATAGACTCCATACCTGCTGCGTCTGAGAAAGGTATGCGTTAGATTATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTCCATACCTGCTGCGTCTGAGAAAGGTATGCGTTAGATTATACT  394

seq1  ATATTTGGACTGCATTGCATTTGAATATAGTGGAGCGATAAAGAATCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGGACTGCATTGCATTTGAATATAGTGGAGCGATAAAGAATCATT  444

seq1  GGGTGCCTCTTGTCCTCCCACTTAGGGACAAAGGGACTCAGCAATTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCCTCTTGTCCTCCCACTTAGGGACAAAGGGACTCAGCAATTTAAG  494

seq1  GAAGAGCATTCAGTAAGGCATTGTTTCTCTACGTTTTTCCCTTGGTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCATTCAGTAAGGCATTGTTTCTCTACGTTTTTCCCTTGGTCTCT  544

seq1  TTCCTCTCACAAGACATAATTACTCATTTTCAAAGATTTAAATCATTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCACAAGACATAATTACTCATTTTCAAAGATTTAAATCATTTCC  594

seq1  TGCTGTGATTTAATTCTCCCACAGATGGGTCACATTTGAGATCCCAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGATTTAATTCTCCCACAGATGGGTCACATTTGAGATCCCAGACT  644

seq1  CCACGTTGCTATAATCTAACACATAGGGAGGAAGCAGGCTTCGCAAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTTGCTATAATCTAACACATAGGGAGGAAGCAGGCTTCGCAAAGAT  694

seq1  GCCACCAATTAACACAGGACTTAGGAAAAAGCAATAACACAATTAATAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAATTAACACAGGACTTAGGAAAAAGCAATAACACAATTAATAAG  744

seq1  GAAACAATCACCGTTCTTGTTTCCAATTCTGCGCGTTAGATTTTTATCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATCACCGTTCTTGTTTCCAATTCTGCGCGTTAGATTTTTATCAG  794

seq1  AAGGGGAAGTGAAATCATCCAATTAGGCAGAATCTAAATACAAGACAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAAGTGAAATCATCCAATTAGGCAGAATCTAAATACAAGACAGAA  844

seq1  AATAACAAGGACCGGAGCTGTGGAATAAAGTGGGGGTATTTTGAGAAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACAAGGACCGGAGCTGTGGAATAAAGTGGGGGTATTTTGAGAAGCA  894

seq1  CAGGATATAGGGTGACAGGACAGTTTTTTTCTAGTAAGAGAAAATAAGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATATAGGGTGACAGGACAGTTTTTTTCTAGTAAGAGAAAATAAGTC  944

seq1  TTTATCAATGTACCATGGTTCTTCACATCTTTGTTCTGGTTCTTCAAAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAATGTACCATGGTTCTTCACATCTTTGTTCTGGTTCTTCAAAAC  994

seq1  CAAATGTGCCTTCCAGACCAGAAAACACAGATATGTTCAACTTGAAAGGA  1050
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAAATGTGCCTTCCAGACCAAAAAACACAGATATGTTCAACTTGAAAGGA  1044

seq1  ATTC  1054
      ||||
seq2  ATTC  1048

seq1: chr19_18517580_18518723
seq2: B6Ng01-043G05.g_67_1210

seq1  GAATTCCAGAAAATACCAACTAAAGAGTGGTGAGACAGACCATGTATGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAATACCAACTAAAGAGTGGTGAGACAGACCATGTATGAC  50

seq1  AATGGTGACATCGTCTCCTAGGCTGGGAATTCTGGATGGAATAGAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGACATCGTCTCCTAGGCTGGGAATTCTGGATGGAATAGAAGAAA  100

seq1  AGATAACGTCCTGAGCATGAGCCTTCTCTCTGCTTCTTCATCGCCATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACGTCCTGAGCATGAGCCTTCTCTCTGCTTCTTCATCGCCATATG  150

seq1  GTGAGGAAGCTCCCTGGCCACAAAATTCCACTGCCAAAATGTTTTGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAAGCTCCCTGGCCACAAAATTCCACTGCCAAAATGTTTTGCACA  200

seq1  GCACATGGGACTAAGCAACCATGGACTGAACAAACTCAAACCATAAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGGGACTAAGCAACCATGGACTGAACAAACTCAAACCATAAGAAA  250

seq1  AACTAAAGAATTTCAAACTGAGAAAACAAATTCATAGCCGTCCACCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAGAATTTCAAACTGAGAAAACAAATTCATAGCCGTCCACCCAGC  300

seq1  ATGAAATTTATGAACAAAATTGACTCAATGGGGAAAATGAAATAAGATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTTATGAACAAAATTGACTCAATGGGGAAAATGAAATAAGATAT  350

seq1  TCATTCCGGTGCCTCAGAACTTACAAATATAAAAACAAATTTACCCATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCGGTGCCTCAGAACTTACAAATATAAAAACAAATTTACCCATGC  400

seq1  CAAACAAAACATGTCACCATTTCTGTGTGCCTCTACCCACTTACCTCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAACATGTCACCATTTCTGTGTGCCTCTACCCACTTACCTCAAT  450

seq1  ATACACTGCTGAAATGAATTCCCTTACCCAGACACTGAACTTTAACTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTGCTGAAATGAATTCCCTTACCCAGACACTGAACTTTAACTGTG  500

seq1  GTAGAATATGCTAATTTTTGTCTTGATTTACTTTACACCTGCAGAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATATGCTAATTTTTGTCTTGATTTACTTTACACCTGCAGAATTAA  550

seq1  AGCCCTTTAGAATTCTATATAAAAATAATATTCTGCTATCTATACCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTTAGAATTCTATATAAAAATAATATTCTGCTATCTATACCTTCC  600

seq1  ACGTCTTAGCTTGCATGTGGATAAAAGAATTTGATTTCTGGTTGTTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTTAGCTTGCATGTGGATAAAAGAATTTGATTTCTGGTTGTTTTTG  650

seq1  TGTTTCAAATCTAAGACCATAGGGGAAAATA-TTTCTGGCAATGTGTCAC  699
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTTTCAAATCTAAGACCATAGGGGAAAATATTTTCTGGCAATGTGTCAC  700

seq1  GTGCACAAATGTATTACAATTTATTTTACCTCCAAAATGACTAGTGAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACAAATGTATTACAATTTATTTTACCTCCAAAATGACTAGTGAGAC  750

seq1  TTAGTTTTAGCCTTTTTTCTATGTTAGCTACTATCTAG-AAAAAAAAACT  798
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTAGTTTTAGCCTTTTTTCTATGTTAGCTACTATCTAGAAAAAAAAAACT  800

seq1  ATTT-CCTCACTCCCATTAGCCTCGGGTGCACTGGTGTAATT-AAAATGC  846
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTTCCCTCACTCCCATTAGCCTCGGGTGCACTGGTGTAATTAAAAATGC  850

seq1  CAACTGTGTCTCTATCATAATTTGTTGGGAAAGTATATAATGAAAATATT  896
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  CAACTGTGTCTCTATCATAATTTTGTGGGAAAGTATATAATGAAAATATT  900

seq1  ATCCCAGGGATACTG-AAAATGATATGAGTTCTTTTATTTTAAAATGATG  945
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  ATCCCAGGGATACTGAAAAATGATATGAGTTCTTTTTTTTTAAAATGATG  950

seq1  ATTAAAATTTACAGATGAAAGAATAAAATTGAGTGTC-TGAAATATGAAC  994
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATAAAATTTACAGATGAAAGAATAAAATTGAGTGTCTTGAAATATGAAC  1000

seq1  TGAAGTGAATAATTTACATTTCTCCTTCAACAGGAAGC-TATCGTTGCTT  1043
      ||||||||||||||||| |||||||||||||||||||| |||||||||||
seq2  TGAAGTGAATAATTTACTTTTCTCCTTCAACAGGAAGCTTATCGTTGCTT  1050

seq1  CTACTTACAAGTTTTTAAAAGTGAGTACTGGATTTTTTTTCCTGGGTTGA  1093
      |||||||||||  |||||| |||||||||||||||||||| ||||| |||
seq2  CTACTTACAAG-GTTTAAAGGTGAGTACTGGATTTTTTTT-CTGGG-TGA  1097

seq1  TTTCTTTATGGTGTTTATTCCATTTGGTTTTAATCTAGTTGCATCATATC  1143
      ||||||||||| | ||||| |||||||  ||||  ||| |||||||||||
seq2  TTTCTTTATGG-GGTTATT-CATTTGGGATTAA-ATAG-TGCATCATATC  1143

seq1  A  1144
      |
seq2  A  1144